May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [T:0081] and [C:0309]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.5 0.4 0.3 -0.3 -0.4 -0.1 -0.1 0 -0.1 -0.3 1 -0.1 0.2 0.3 -0.1 0.7 -0.2 -0.4 -0.3 0.4
F -0.1 -0.4 0.9 -0.4 1.6 -0.1 0 -0.3 0 0.2 -0.2 0 -0.3 -0.4 -0.1 -0.6 0.2 -0.1 0.2 -0.1
I -0.1 0.1 -0.4 0.2 0.5 -0.1 0 -0.5 0 -0.2 0.1 -0.1 -0.1 -0.5 -0.1 1.1 -0.1 0.9 -0.1 -0.2
L -0.5 -0.4 0.6 0.3 1.1 -0.1 0 -0.2 0 -0.2 -0.1 -0.1 -0.3 -0.2 -0.1 -0.4 -0.2 -0.3 0.8 0.7
V 0.3 0.1 -0.5 0.1 0.2 -0.1 0 0 0 -0.2 -0.3 -0.1 0.4 -0.2 -0.1 0.2 -0.4 0.3 0.3 0.2
M -0.2 -0.3 -0.1 0.8 0.7 0 0 -0.2 0 -0.1 -0.1 0 0.1 -0.3 0 0.7 -0.3 0.1 0.2 -0.7
W 0.1 -0.2 0.8 -0.1 0.1 0 0 -0.1 0 -0.1 0 0 -0.1 -0.1 0 -0.4 -0.2 0 -0.2 0.1
Y 0.3 0.7 -0.1 -0.1 -0.2 0 0 0.7 0 -0.1 -0.1 0 -0.2 -0.2 0 -0.6 -0.2 -0.3 0.3 0.1
D -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0.1 0 0 0 -0.2
E -0.2 -0.1 0 0 -0.1 0 0 0 0 0 0 0 -0.1 -0.1 0 -0.6 -0.1 -0.1 -0.1 0.9
K -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.3 0 0 0 0.1
R 0.5 0.2 1 -0.1 -0.2 0 0 -0.2 0 -0.1 -0.1 0 -0.1 -0.2 0 -1 -0.4 0.2 0.8 -0.1
H 0.2 -0.2 -0.3 -0.1 -0.4 0 0 -0.2 0 0.5 -0.1 0 -0.2 -0.2 0 -0.4 0 0.6 0.7 0.3
N 0.2 -0.2 -0.2 -0.1 -0.4 0 0 -0.1 0 -0.1 0 0 -0.1 -0.2 0 0.5 0.4 -0.2 -0.2 0.7
Q -0.7 -0.3 0.1 -0.1 -0.3 -0.1 0 -0.2 0 1.1 -0.1 0 0 1.3 0.5 -0.5 0.8 -0.4 -0.3 -0.4
S 1.2 0.1 -0.6 -0.3 -0.4 0.3 -0.1 0.2 -0.1 -0.3 0.2 -0.1 0.3 0.7 -0.1 0.6 0.3 0.4 -0.6 -1.1
T 0 -0.4 -0.6 -0.4 -0.7 0.1 -0.1 1.3 -0.1 -0.4 -0.2 0.2 0.3 0.5 -0.2 0.6 1 0.1 -1.2 0.8
G 0.6 0.8 -0.1 -0.1 -0.3 0 0 -0.2 0 -0.1 -0.1 0 -0.1 -0.2 0 0.6 -0.2 -0.1 -0.1 -0.1
P 0 -0.2 -0.4 -0.1 -0.5 -0.1 0 -0.2 0 0.3 -0.1 0 0.3 -0.3 0 1.3 -0.1 -0.3 0.1 0.3
C -0.2 0.6 -0.1 0.5 -0.2 0 0 0.2 0 0 0 0 0.2 -0.2 0 -0.3 -0.1 -0.1 -0.1 -0.4
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0081 1 0.2 0.5 0.7 0.6 0.2 -0.6 0 -1 -0.8 -1.1 0.1 0.2 -0.3 0.4 0.8 0.8 0.1 -0.1 -0.5
0309 1.2 0.6 0.1 -0.6 -0.1 -0.9 -1.1 0.1 -1.1 0.1 -0.4 -0.9 0.2 -0.1 -0.8 1.5 0.2 0.4 0.5 2
Select residue pair below:
i_j Score Prob
0081_0254 0.936 0.86
0081_0309 0.799 0.71
0081_0322 0.791 0.70
0067_0081 0.774 0.67
Local Interactions:
i_j Score Prob
0079_0081 1.117 0.95
0081_0082 0.753 0.64
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0108 seconds.