May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [K:0075] and [D:0082]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.7 0 -0.1 0.1 -0.6 0.9 0 0.1 -0.1 0.2 0.4 -0.6 0.3 -0.1 -0.3 -0.4 0.3 -0.2 -0.1 -0.2
F -0.3 -0.2 -0.3 0.1 0 0.3 0 0.5 -0.2 -0.2 0.7 -0.3 -0.3 -0.2 -0.1 0.7 0 -0.1 -0.1 -0.1
I 0.9 0.3 -0.4 -0.5 0.8 -0.2 0 -0.4 -0.5 0.3 -0.4 -0.7 1 -0.9 -0.2 -0.4 0.1 0.8 0.7 -0.2
L -0.1 0.7 0.2 -0.3 0.2 -0.4 0 0.4 -0.1 -0.6 0 0.1 -0.2 0 -0.2 0.5 -0.3 0 0.5 -0.2
V 0.6 0 -0.1 -0.3 0.7 -0.2 0 -0.1 0.1 0.2 -0.4 -0.5 -0.1 -1.3 0 -0.4 0.1 1.3 0.1 0.6
M 0.7 0.5 0 -0.4 0.3 -0.3 0 -0.2 -0.4 -0.5 -0.2 -0.1 -0.3 -0.7 -0.2 0.8 1.1 0.3 -0.1 -0.2
W -0.2 0.3 -0.1 0.1 -0.2 -0.1 0 -0.2 -0.5 0.7 -0.1 0.5 0.1 -0.1 -0.1 -0.3 0 -0.1 0 0
Y -0.2 -0.2 -0.2 1 -0.2 -0.1 0 0.1 0.1 -0.1 -0.2 -0.2 -0.3 0.1 0.8 0 -0.2 -0.2 0 0
D -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0 -0.2 0.1 -0.1 0.3 0.1 0.6 0.6 -0.1 0.2 -0.5 -0.1 0 -0.1
E -0.2 0.3 -0.2 -0.2 -0.2 -0.2 0 -0.3 -0.3 0 -0.1 0.6 0.1 1.1 -0.1 0.1 -0.4 -0.1 -0.1 -0.1
K -0.7 0.1 -0.2 -0.2 -0.4 0.3 -0.2 -0.3 1 1 0.1 0.1 0.1 0.9 -0.4 0.1 -0.1 -0.4 0.1 -0.1
R -0.7 0 0.5 0.7 -0.9 0.3 -0.2 0 1.2 1.1 -0.2 -0.2 -0.1 0.6 -0.1 0.1 -0.4 -0.1 -0.4 -0.5
H -0.4 -0.3 -0.4 -0.4 -0.4 -0.3 0 -0.2 0.3 -0.1 0.2 1.7 0.6 -0.1 1 -0.3 -0.4 -0.2 -0.2 -0.2
N 0.7 0.1 0.1 -0.3 0 -0.2 0 -0.3 0.2 0 0.2 -0.4 0 -0.4 0.1 -0.1 0.7 -0.1 -0.1 -0.1
Q 0 -0.5 -0.3 -0.4 -0.3 -0.2 0 -0.4 1 -0.5 -0.3 1.1 0.4 0.5 0.6 0.1 -0.4 -0.1 -0.1 -0.2
S 0.2 0 0.9 -0.1 -0.6 0 -0.1 0.5 -0.5 -0.6 0.1 -0.1 -0.3 0.7 -0.2 -0.2 0.5 -0.3 -0.1 0.2
T -0.1 -0.4 0.1 -0.1 0.4 0.5 0 0.5 -0.4 -0.3 -0.1 -0.6 0 0.2 -0.3 0.4 0.9 -0.1 -0.1 -0.2
G -0.5 0.2 -0.3 0.8 -0.1 -0.4 0 0.1 0.3 -0.3 0.2 0.7 0 -0.6 -0.1 0.1 -0.4 0.2 -0.1 0.3
P -0.3 -0.5 0.6 0.4 1.1 -0.1 0.5 0.5 -0.6 -0.6 0 -0.3 -0.3 0.4 0.2 -0.6 -0.1 -0.4 -0.1 0.5
C -0.1 -0.1 -0.3 -0.1 -0.1 0.5 0 -0.1 -0.1 0 0 -0.1 -0.1 0 0 -0.2 -0.1 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0075 0.3 -0.3 0.2 0.1 0.4 -0.3 -0.8 -0.3 -0.7 -0.5 1.3 1.1 0.1 -0.1 -0.1 0.1 0.2 -0.2 0.6 -1.6
0082 0.8 0.3 -0.5 0.5 -0.1 -0.1 -0.8 0.6 0.3 -1.3 0 0.4 0.6 0.4 -0.4 1.1 1.3 -0.5 -0.7 -0.6
Select residue pair below:
i_j Score Prob
0077_0082 2.323 1.00
0074_0082 0.897 0.82
0075_0082 0.830 0.75
0082_0085 0.799 0.71
0079_0082 0.771 0.67
0071_0082 0.765 0.66
0082_0327 0.751 0.64
Local Interactions:
i_j Score Prob
0081_0082 0.753 0.64
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0129 seconds.