May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ccr6 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [F:0073] and [I:0090]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.6 0.4 0.3 0.2 -0.2 0.2 -0.1 -0.1 0 0 0 -0.1 0 0 0 -0.2 -0.1 -0.2 -0.1 1
F 0.6 0.2 0.3 0.5 0.6 -0.6 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.5 0.1 -0.2 -0.1 0.3
I -0.1 -0.1 0 0.2 -0.7 -0.1 0 0 0 0 0 0 0 0 0 0.4 0.5 0 0 -0.2
L 0.8 0.1 0 -0.1 -0.1 -0.5 -0.1 -0.2 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 0.7 0.2 0.2 -0.1 0.2
V 0.1 0.1 -0.5 0.6 0 0.1 0 0.4 0 0 0 0 0 0 0 -0.2 -0.2 -0.1 0 -0.2
M -0.5 -0.2 0.2 0.1 0.7 -0.3 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 -0.1
W 0.2 -0.1 -0.1 0.2 0.1 0.1 0 0 0 0 0 0 0 0 0 -0.1 -0.2 -0.1 0 -0.2
Y 0 0.6 0 -0.7 0 0.7 0.4 -0.1 0 0 0 -0.1 0 0 0 -0.3 -0.3 -0.1 0.4 -0.3
D -0.1 -0.1 -0.2 -0.2 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.3 -0.2 -0.6 0.2 0.4 -0.1 0 0 0 0 0 0 0 0 0 0.1 -0.1 0 0 -0.1
K -0.3 -0.3 0.7 0.6 0.4 -0.1 0.3 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.4 -0.2 -0.1 0.7
R -0.2 -0.6 0 0.4 0.4 -0.1 0.1 -0.4 -0.1 -0.1 -0.1 0.8 -0.1 -0.1 -0.1 0.8 1 -0.2 -0.2 0.5
H -0.4 0.3 0.1 0.1 0.2 0.1 -0.1 -0.1 0 0 0 -0.1 0 0 0 0.3 -0.4 -0.1 -0.1 0.3
N -0.3 0.3 0.3 0.2 -0.1 -0.3 0 -0.1 0 0 0 0 0 0 0 0.3 -0.1 -0.1 0 -0.2
Q 0.1 -0.6 0.5 0.7 0.3 0.2 -0.1 -0.1 0 0 0 -0.1 0 0 0 -0.4 0.2 -0.1 0 -0.1
S -0.1 0.8 0.1 0.1 0.3 0.1 -0.1 0.4 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.2 -0.1 -0.2
T 0.7 0.4 0.4 -0.3 0 0 -0.2 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 0.6 0.6 -0.1 -0.6
G 0.3 0 0.5 -0.1 -0.3 0 0 -0.1 0 0 0 0 0 0 0 -0.2 -0.1 0.4 0 -0.2
P -0.3 0.1 -0.5 -0.4 0 0.3 0 0 0 0 0 0 0 0 0 0.4 -0.1 0 0 -0.1
C 1.3 0.1 0.2 -0.7 -0.1 0.2 -0.1 0.5 0 0 0 -0.1 0 0 0 -0.3 -0.4 0.1 0 -0.1

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0073 0.3 0.7 -0.8 0.9 -0.3 -0.8 -0.7 0.2 -1.9 -1.4 1.1 2.1 0.5 -0.4 0.5 0.9 0.8 -0.1 -1.2 0.6
0090 1.6 1.5 2.1 2.4 2.4 0.7 -0.8 -0.6 -1.2 -1.2 -1.2 -0.9 -1.2 -1.2 -1.2 0.2 0.4 -0.7 -1 0.5
Select residue pair below:
i_j Score Prob
0073_0090 0.868 0.79
Local Interactions:
i_j Score Prob
0073_0074 1.020 0.91
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...

Page generated in 0.0107 seconds.