May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [V:0067] and [A:0091]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 0.1 0.3 -0.4 0.4 0.1 -0.2 -0.1 -0.1 0.5 0 -0.1 0 -0.3 0 -0.1 -0.1 -0.6 0.4 -0.3
F -0.3 -0.3 -0.1 -0.1 -0.1 0 -0.1 0 0 0 0 0.7 0 -0.1 0 0.7 -0.3 -0.1 0 0.3
I 0.5 -0.7 -0.1 -0.4 0.2 0.1 0.3 0.5 -0.1 -0.3 0 -0.1 0 0.1 0 -0.2 0.7 0.7 -0.1 0.3
L 0 0.3 -0.4 0.5 0.1 0.1 0.1 -0.1 -0.1 -0.1 0 -0.1 0 0.1 0 0.7 -0.4 0.4 -0.1 -0.1
V 0.7 0.5 -0.1 0.4 -0.2 -0.2 0.3 -0.2 0.1 -0.2 -0.1 -0.2 -0.1 0.1 -0.1 0.4 0.2 -0.1 -0.3 -0.1
M 0.1 -0.1 -0.1 0.3 -0.1 0 -0.1 0 0 0 0 0 0 -0.1 0 0.1 0.5 -0.1 0 -0.2
W -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
Y 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 -0.1 0 0 -0.1
D -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
E -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
K -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
R -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
H -0.2 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 -0.3 -0.1 0 0 0.8
N 1.1 -0.1 -0.2 -0.2 -0.2 -0.1 -0.1 -0.1 0 -0.1 0 0 0 0.2 0 -0.1 -0.1 -0.1 0 0
Q -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
S 0 0.5 0.3 0.1 0.3 0.1 -0.2 0 -0.1 -0.2 -0.1 -0.2 -0.1 -0.4 -0.1 0.4 -0.2 -0.1 -0.1 0.2
T -0.2 0 -0.2 0 0 -0.1 -0.3 0.2 0 0.3 0 -0.1 0 0.3 0 0.3 -0.1 -0.3 -0.1 0.6
G -0.4 -0.1 -0.1 -0.1 0.3 0 -0.1 0 0 0 0 0 0 -0.1 0 -0.1 0.9 -0.1 0 -0.2
P -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
C -0.3 0.2 0.6 -0.1 -0.1 0 0.4 0 0 0 0 0 0 0.4 0 -0.5 -0.4 0.3 0 -0.4
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0067 -0.1 0.3 2 1.3 1.1 0.1 -0.7 -0.5 -0.7 -0.7 -0.7 -0.7 -0.2 -0.3 -0.7 1.1 0.3 -0.1 -0.7 0
0091 0.7 0.1 0.1 0 0.5 -0.2 0 -0.1 -0.4 -0.5 -0.6 -0.4 -0.6 0.1 -0.6 1.3 0.8 -0.3 -0.5 1.1
Select residue pair below:
i_j Score Prob
0067_0312 1.746 1.00
0067_0071 1.546 1.00
0067_0313 1.276 0.98
0067_0317 1.274 0.98
0067_0267 1.189 0.97
0067_0091 1.045 0.92
0067_0085 0.847 0.77
0067_0081 0.774 0.67
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0177 seconds.