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Coupling matrix for [L:0055] and [L:0062]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.5 -0.8 -0.2 0.6 0.4 -0.1 -0.1 -0.1 0 0 0 0 -0.1 0 -0.1 -0.3 0 0 0.8 0.4
F 0.2 0.7 0.7 0.2 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 0.2 -0.6 -0.1 0.5
I 0 0.3 0.7 0.1 0.3 0.6 -0.3 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 0.1 0.3 -0.8 0.5 0.1
L 0.2 0.1 0.1 0.2 0.3 -0.1 0.6 -0.3 -0.1 -0.1 -0.1 -0.1 0 -0.1 0.1 0.3 0.2 0.3 0.7 -0.2
V 0.7 0.4 0.6 0.2 0.2 0 -0.2 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 0.2 0.1 0.3 -0.3
M 0 -0.2 -0.1 0 0.1 0.2 -0.1 0 0 0 0 0 0 0 0 -0.2 0.3 0 0.1 0.5
W -0.1 -0.1 -0.1 -0.3 0.2 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0
Y 0.4 -0.1 -0.2 -0.3 -0.3 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.2 0.5
D -0.1 -0.1 -0.1 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
E -0.1 -0.1 -0.2 0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0
K -0.1 -0.1 -0.1 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
R -0.1 -0.1 -0.1 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
H -0.1 -0.1 -0.1 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0
N -0.1 0.4 -0.1 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.2 0
Q 0.1 -0.1 -0.3 -0.3 -0.3 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0.4 0.2 0
S -0.1 0.1 0.3 -0.1 0.4 0.2 0 0 0 0 0 0 0 0 0 -0.3 -0.4 -0.3 0.3 0.1
T -0.3 0.5 0 0.8 0.2 0 -0.1 -0.1 0 0 0 0 0 0 -0.1 -0.3 0.2 0.3 0.1 -0.5
G -0.2 -0.5 0.7 0 0.1 -0.2 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0.7 0.2 -0.2
P 0 0.7 0 0.3 0.1 -0.1 0 0 0 0 0 0 0 0 0 -0.2 0 0.5 -0.7 -0.2
C -0.4 -0.4 -0.4 0.4 0.4 0 0 0 0 0 0 0 0 0 0 1 0.1 0.1 -0.7 -0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0055 1.3 1.7 2.4 2.7 2.3 0.7 -1.3 -1.1 -1.5 -1.4 -1.5 -1.5 -1.4 -1.3 -1.1 0.3 1.2 0.3 0.1 0
0062 0.7 1.1 1.7 1.9 1.8 0.3 -0.9 -0.9 -1 -1 -1 -1 -1 -1 -0.9 0.3 0.6 0.4 0.6 0.3
Select residue pair below:
i_j Score Prob
0055_0062 0.924 0.85
0055_0180 0.785 0.69
Local Interactions:
i_j Score Prob
See all coupling residues
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
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