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Coupling matrix for [V:0041] and [Q:0043]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.8 0.1 -0.2 0.2 0.2 0.2 -0.2 -0.2 0.2 -0.7 0.4 -0.6 0.2 -0.7 0.1 -0.4 -0.4 0.8 0.1 -0.1
F 0.4 -0.1 0.1 -0.1 -0.3 -0.1 0.3 0.3 0.3 0.3 -0.5 0.1 -0.2 0.4 -0.2 0.5 -0.5 -0.5 0 0
I 0.3 -0.1 -0.5 -0.5 -0.1 -0.2 -0.2 -0.3 0.9 0.3 -0.3 0 -0.2 -0.2 0.3 0.3 0.3 0.2 -0.5 -0.1
L -0.6 -0.2 0.5 0.3 -0.3 0.2 1.6 -0.3 -0.4 0.2 -0.3 -0.3 0.2 -0.3 -0.1 0.1 0.1 -0.6 0.9 -0.1
V 0.3 0 -0.2 -0.2 0.1 -0.1 -0.3 -0.1 -0.4 0.1 0.8 0.5 -0.1 -0.3 0.5 0.3 -0.6 -0.1 -0.6 -0.1
M -0.3 -0.1 0.4 0.5 -0.2 -0.1 -0.1 -0.1 -0.4 0 -0.1 0.1 -0.1 0.4 0.2 -0.1 -0.3 -0.2 0.2 0
W -0.2 0 -0.1 -0.1 -0.1 0 0.7 -0.1 -0.3 0.8 -0.2 -0.2 -0.1 0 -0.1 0 -0.2 -0.2 0 0
Y -0.4 0.4 0 -0.3 -0.1 -0.1 -0.1 -0.2 0.5 0.1 0.3 0.5 -0.2 0.1 -0.2 0 0.1 -0.4 0.2 0
D -0.5 -0.1 0.3 -0.1 0.6 -0.2 -0.3 -0.3 -0.1 -0.7 0.3 0.5 0.4 0.7 0 -0.1 1 -0.6 0 -0.1
E 0.1 -0.1 0 0 -0.2 -0.1 -0.1 0.2 -0.3 0 -0.1 0.2 -0.3 0.4 -0.5 -0.3 -0.5 0.9 0.5 0
K -0.1 -0.2 0 0.4 -0.3 -0.1 -0.1 0.2 0.4 -0.1 -0.5 -0.6 0.2 -0.1 0.1 -0.4 -0.2 0.8 0.3 0
R -0.3 -0.1 -0.1 -0.2 -0.2 -0.1 -0.1 -0.1 0.3 -0.3 -0.2 0 0 0.5 -0.2 0.6 0.7 -0.2 0.1 0
H -0.2 -0.1 0.3 0 0.1 -0.1 -0.1 -0.1 -0.5 -0.3 0.1 -0.3 0.7 0 0.2 0.4 -0.2 0.7 -0.4 0
N -0.3 -0.2 -0.1 0.2 0.1 -0.3 -0.3 0.5 0.4 -0.2 -0.3 -0.6 0 0.5 1.1 0 0.8 0.2 -0.4 -0.1
Q -0.6 -0.1 0 -0.1 -0.2 0.3 0.3 -0.2 0.2 0.2 -0.2 0.6 -0.2 -0.2 0.3 0.2 -0.5 0.6 0.2 -0.1
S 0.2 -0.3 0 -0.6 0.3 0.2 -0.3 0.3 0.5 0.8 0.4 -0.2 0.1 0.5 -0.4 -0.6 0.4 -0.2 0.1 -0.1
T 0.1 0.3 0.2 0.2 0.1 0 -0.4 0 -0.1 -0.3 0.3 0 0.3 -0.5 0 -0.3 0 0.5 -0.1 -0.1
G 0.7 -0.1 -0.5 -0.2 0.6 -0.2 -0.2 -0.1 -0.1 -0.2 0.4 0.2 0.2 -0.5 -0.5 0.6 0.3 -0.7 0.1 -0.1
P 0.9 -0.2 -0.2 0.2 -0.2 0.1 -0.4 0.5 -0.3 0.4 0.4 -0.1 -0.5 -0.1 0.2 -0.6 -0.5 -0.6 0.3 0.8
C -0.1 0 -0.1 -0.1 -0.1 0 0 0 -0.1 -0.1 -0.1 0.4 0 -0.1 0 -0.1 -0.1 -0.1 -0.1 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0041 0.3 -0.4 0.3 0.3 0.3 -0.2 -1 -0.8 0 -0.1 0.2 -0.4 -0.1 0.6 0 0.8 0.4 -0.1 0.1 -1.3
0043 0.2 -0.7 0.1 0.2 0.1 -0.9 -0.9 -0.4 0.8 0.4 0.5 0.2 -0.3 0.4 0.2 1 0.4 0.1 0.6 -1.4
Select residue pair below:
i_j Score Prob
0034_0043 0.906 0.83
0043_0173 0.870 0.79
0043_0046 0.865 0.79
0043_0051 0.784 0.69
Local Interactions:
i_j Score Prob
0041_0043 1.182 0.97
0042_0043 0.820 0.74
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
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