May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0038] and [R:0042]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 0.4 0 0 0.2 0.1 0.6 -0.1 -0.4 -0.1 -0.3 0 -0.4 0.2 0.1 0.4 0.3 0 -0.1 -0.1
F 0.1 -0.4 -0.3 -0.4 -0.1 -0.2 0.1 -0.1 0.1 1 -0.2 -0.2 0 -0.2 0 0.8 0.1 0.3 -0.4 0
I 0.5 -0.2 -0.2 -0.4 0.3 -0.2 0.5 0.6 1.1 0.5 -0.4 -0.5 0 -0.1 -0.5 0.4 -0.1 -0.3 -0.5 -0.1
L -0.5 0.4 -0.2 -0.3 -0.3 -0.2 0 -0.4 0.2 0.2 -0.4 -0.1 0.1 0.1 0.2 0.3 -0.3 0.6 0.1 -0.1
V 0 0.2 -0.1 0.3 -0.3 -0.2 -0.3 0.7 0.7 0.6 -0.2 -0.5 -0.4 0 -0.3 0.4 -0.2 0.2 0 -0.1
M -0.2 0.2 0.1 0.4 0.4 -0.1 -0.4 0.4 0.2 0.1 -0.4 0 1.1 -0.4 -0.4 0.1 0.1 -0.4 -0.5 0
W 0 0 0 -0.1 0 0 0.2 -0.1 0 -0.1 -0.1 -0.1 0 -0.1 -0.1 -0.1 0.1 -0.1 0 0
Y -0.2 -0.3 -0.2 0 0.4 -0.2 -0.1 -0.2 0.1 0.5 0 0.2 0.1 -0.4 -0.4 0.4 0.1 0.1 0.3 0
D -0.3 0.1 0 0.4 -0.3 -0.1 0 -0.1 -0.1 -0.1 -0.3 0 -0.3 -0.1 0.5 0.1 -0.1 -0.1 1.2 0
E 0.2 0 -0.2 0.7 0 -0.1 -0.1 -0.1 -0.3 0.1 0.6 0.8 -0.2 -0.2 0 -0.3 -0.3 -0.1 -0.4 0
K -0.3 -0.1 0.3 0 0.5 -0.1 -0.1 0 -0.3 -0.5 0.6 1.3 -0.5 0.4 0.5 -0.4 -0.4 0.3 -0.6 -0.1
R 0.4 -0.1 -0.4 -0.4 -0.1 -0.1 0.1 0.3 0.2 -0.7 -0.3 -0.3 0.7 0.8 -0.1 -0.7 1.2 0.2 -0.4 0
H 0.2 -0.2 0.3 0.1 0.5 -0.1 0.2 0 -0.2 -0.1 1.2 0 -0.3 -0.3 -0.3 -0.5 0 -0.2 0.1 0
N 0.7 0.2 0.1 -0.5 -0.2 -0.2 -0.5 -0.5 -0.3 -0.1 0.5 0 -0.2 0.4 0.4 0 0.5 -0.5 0 0
Q -0.1 0.2 0.2 0.3 0 0.7 -0.4 0.4 0 0 0 -0.3 -0.2 -0.2 -0.2 -0.5 0.3 0.2 -0.3 0
S 0.2 0.3 -0.1 0.1 0 0.1 1.1 -0.5 -0.3 -0.5 -0.5 -0.5 -0.4 -0.1 0.5 0.6 0.1 0.4 0.1 -0.1
T 0 -0.4 -0.3 0.2 -0.3 0.1 0.5 -0.3 -0.2 -0.2 -0.2 0.1 -0.4 0.2 0 -0.2 -0.2 0.5 0.8 0.2
G -0.3 -0.1 0.2 -0.2 -0.3 -0.1 -0.3 -0.3 -0.2 0.3 -0.1 0.1 0.8 -0.3 0.6 0.2 0.1 0 0.2 0
P 0.1 -0.4 0.5 0 -0.1 0.2 -0.2 0.7 0.2 -0.1 0.6 0.1 -0.4 -0.2 -0.1 0.3 -0.4 -0.5 0 -0.1
C 0.4 0 0 -0.1 0 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 -0.1 -0.1 0 -0.1 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0038 0.7 0.1 0.1 1 0.2 -0.3 -1.1 -0.3 0.2 -0.2 0.1 -0.3 -0.1 0.1 -0.6 0.3 0.4 -0.1 0.3 -1.2
0042 0 -0.1 -0.1 0.5 0 -0.7 -0.1 0.3 0.4 0.6 0.3 0.3 -0.1 0.2 0.2 1.2 -0.1 0.1 0.1 -1.6
Select residue pair below:
i_j Score Prob
0034_0038 1.103 0.95
0033_0038 1.030 0.92
0035_0038 0.899 0.82
0038_0042 0.847 0.77
0038_0041 0.781 0.68
Local Interactions:
i_j Score Prob
0037_0038 1.239 0.98
0038_0039 0.889 0.81
0038_0040 0.810 0.72
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0118 seconds.