May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [M:0033] and [V:0184]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.5 -0.5 0 0 -0.3 0.2 0.1 0.5 0 0.2 -0.3 0.2 0.3 -0.2 0.2 -0.3 -0.1 -0.1 -0.1 -0.2
F 0.2 -0.2 0.2 -0.2 0.5 0 -0.1 -0.4 0 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 0.6 0 0 -0.1
I 0.1 0.2 -0.3 0.4 0.5 0 -0.1 0.4 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 0 -0.1
L -0.2 -0.2 0.3 -0.1 0.2 -0.2 0.3 0.1 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 -0.1 0.6 0 0 -0.1
V -0.2 -0.3 -0.1 -0.4 0.8 0.3 -0.1 -0.2 -0.1 -0.1 0.3 0.4 -0.1 -0.2 -0.1 -0.2 0.1 -0.1 0 -0.1
M -0.2 -0.4 -0.3 0 0.4 -0.2 0.4 0.3 0 0 0.2 -0.1 -0.1 0 -0.1 -0.1 0.3 0 0 -0.1
W -0.2 -0.2 0 -0.1 0 -0.1 0 -0.1 0 0 0 0.4 0 0 0 0 0 0 0 0
Y 0.2 -0.4 -0.1 -0.1 -0.1 0.5 -0.1 -0.2 -0.1 -0.1 0.3 -0.2 -0.2 0.3 -0.1 0.3 -0.2 0.4 0 -0.1
D 0 0.2 -0.3 0.6 0.4 0.2 -0.2 0.1 -0.1 -0.1 0.1 0 0.1 -0.2 -0.1 -0.3 -0.4 -0.1 -0.1 0.3
E 0.1 0.4 0.1 -0.2 0.2 -0.2 0.1 0.6 -0.1 0.2 0.5 -0.3 -0.2 -0.2 -0.2 -0.2 0.1 -0.1 -0.1 -0.1
K -0.4 0.3 0.1 0.7 -0.1 -0.3 -0.1 0.1 -0.1 0.1 -0.1 -0.2 -0.1 -0.1 0.1 0.3 -0.2 -0.1 0 0
R 0.3 0.6 0 -0.3 -0.4 0 0.3 -0.2 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 0 -0.1
H -0.2 -0.2 0.3 -0.2 0 -0.1 0 -0.1 0 0 0 -0.1 0 0 0.5 -0.1 -0.1 0 0 0
N 0.4 0 0.3 -0.2 0.2 0.2 -0.2 -0.5 0.2 -0.2 -0.4 0.2 0.2 0.5 0 0.1 -0.4 -0.1 -0.1 -0.1
Q 0.3 0.2 -0.3 0.3 0.3 -0.3 -0.1 -0.4 -0.1 0.3 -0.1 0.3 -0.1 -0.1 -0.1 -0.1 -0.2 0 0 0
S 0.2 -0.8 0.3 0.5 -0.4 0.5 -0.3 0.1 0.5 -0.3 0.1 -0.4 0.2 -0.2 0.2 0.1 -0.1 0.2 -0.1 -0.1
T -0.8 0.7 -0.1 -0.3 -0.4 -0.2 -0.3 1.1 -0.1 0.6 0.7 0.1 -0.3 0.5 -0.3 0.8 -0.2 -0.1 -0.1 -0.2
G 0 0.3 0.7 0.1 -0.3 0.2 -0.2 -0.1 -0.2 -0.2 -0.3 0.3 0.3 -0.1 0.2 -0.3 -0.1 -0.1 -0.1 0.3
P 0.3 -0.1 -0.2 -0.3 -0.2 -0.5 -0.2 -0.1 0.4 -0.1 0.2 0 0.5 -0.2 0.4 -0.2 0.3 -0.1 0 0.7
C 0.3 0.6 -0.4 0.1 -0.4 -0.1 0 -0.1 0 0 0 0 0 -0.1 0 -0.1 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0033 0.7 -0.3 -0.2 -0.1 0 -0.4 -0.9 0 0.5 0.6 -0.3 -0.5 -0.9 0.4 -0.1 0.9 1.1 0.4 0.5 -0.8
0184 0.9 1.1 1.1 1.4 1.4 0.1 -0.2 0.8 -0.8 -0.3 -0.3 -0.3 -0.2 -0.7 -0.5 -0.3 0.3 -0.9 -1.2 -0.7
Select residue pair below:
i_j Score Prob
0033_0038 1.030 0.92
0033_0037 1.019 0.91
0033_0184 0.923 0.85
0033_0042 0.850 0.77
Local Interactions:
i_j Score Prob
0033_0035 2.076 1.00
0033_0034 1.617 1.00
0031_0033 1.371 0.99
0032_0033 1.330 0.99
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0205 seconds.