May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [K:0233] and [G:0234]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 -0.1 0 -0.3 -0.1 0.4 -0.1 -0.1 0.3 1.3 0.5 -0.1 -0.1 0.2 -0.4 -0.3 0.2 -0.2 -0.1
F 0 0 0 0 0 0 0 0 0.1 0 -0.1 0 0 -0.1 0 0 0 -0.6 0 0
I 0 0 0 0 0 0 0 0.5 -0.1 0 -0.1 0 0 -0.1 0 0 0 -0.6 0 0
L 0 0 0 0 0 0 0 0 -0.1 0 0.1 0.1 0 -0.1 0 0 0 -0.5 0.5 0
V -0.1 0 0 0 0 0 0 0 0.1 -0.1 0.6 0 0 -0.1 0 -0.1 0 -0.4 0.4 0
M 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 -0.2 0 0
W 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 -0.4 0 0
Y -0.1 0 0 0 0 0 0 0 -0.2 -0.1 -0.1 0 0 -0.1 0 -0.1 0.4 -0.9 0.4 0
D 0.1 -0.1 -0.2 -0.1 -0.3 -0.1 -0.1 -0.2 -0.3 0.5 -0.3 -0.2 0.5 0.6 -0.3 -0.1 -0.1 0.6 0 0.1
E -0.2 0 -0.1 0 0.2 0 0 -0.1 -0.4 -0.2 -0.3 -0.1 -0.1 0 -0.1 -0.3 0.2 1.2 -0.1 0
K 0.1 -0.1 0.2 -0.1 -0.2 -0.1 -0.2 -0.3 0.9 -0.2 -0.5 0 0 0.2 -0.4 0.4 -0.6 1.5 -0.1 -0.1
R -0.1 0 0 0 0.3 0 0 0 0.2 0.2 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.4 -0.1 0
H 0 0 -0.1 0 -0.2 0 0 -0.1 0.4 0 -0.3 -0.1 -0.1 -0.1 -0.1 0.1 -0.2 0.7 -0.1 0
N -0.4 -0.1 -0.2 -0.1 0.3 -0.1 -0.1 0.2 0.2 -0.5 -0.2 0.2 0.2 0.3 -0.2 0.5 -0.4 0.8 0.1 -0.1
Q 0.1 0 -0.1 0 -0.2 0 -0.1 -0.1 0.3 -0.3 0 -0.1 -0.1 -0.2 -0.1 0 -0.3 1.4 -0.2 0
S 0.7 0 -0.1 0 -0.2 0 0 -0.1 0.5 0.6 -0.4 0.3 -0.1 0.2 0.2 -0.3 -0.2 0 -0.2 0
T 0.1 0 0 0 -0.1 0 0 0 -0.4 0.3 0.5 -0.1 -0.1 -0.2 -0.1 0.3 -0.1 0.3 -0.1 0
G -0.5 -0.2 0.4 -0.2 1 -0.2 -0.3 0.4 0.3 -0.1 0.2 -0.4 -0.2 0.3 1 0.1 1.6 -0.8 -0.2 -0.3
P 0.9 0 -0.1 0 -0.2 0 -0.1 -0.1 0.1 0.1 0.5 -0.1 -0.1 0.5 -0.2 0.6 -0.2 0 -0.2 -0.1
C 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 -0.4 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0233 1.1 -1.2 -1.1 -1 -0.6 -1.4 -1.5 -0.8 1.2 0 1.4 0.1 0.2 1.1 0.6 0.5 -0.1 2.4 0.6 -1.5
0234 0.3 -1.5 -0.9 -1.5 -0.2 -1.5 -1.3 -0.8 1.7 0.4 0.9 -0.5 -0.8 1.1 -0.6 0.4 0 3.9 -0.4 -1.4
Select residue pair below:
i_j Score Prob
0181_0233 0.804 0.76
0230_0233 0.610 0.45
Local Interactions:
i_j Score Prob
0233_0234 1.041 0.94
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.0186 seconds.