May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [P:0163] and [D:0164]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 -0.1 0 -0.1 0 0 0 0.7 -0.2 -0.2 -0.1 -0.1 0.4 -0.4 -0.4 0.1 0.2 0 0
F 0 0 0 0 0 0 0 0 -0.3 0.2 0 0 0 0.2 -0.1 -0.2 0 0 0 0
I 0 0 0 0 0 0 0 0 -0.2 -0.1 0 0 0 -0.1 0 -0.1 0 0 0 0
L 0 0 0 0 0 0 0 0 0.5 -0.4 0 -0.1 0 0.4 -0.1 -0.2 -0.1 0 0 0
V 0 0 0 0 0 0 0 0 -0.7 -0.3 0 0 0 -0.2 -0.1 -0.4 -0.1 0 0 0
M 0 0 0 0 0 0 0 0 -0.2 -0.1 0 0 0 -0.1 0 -0.1 0 0 0 0
W 0 0 0 0 0 0 0 0 -0.2 -0.1 0 0 0 -0.1 0 -0.1 0 0 0 0
Y 0 0 0 0 0 0 0 0 -0.4 -0.1 0.5 0 0 -0.1 0 -0.1 0 0 0 0
D -0.1 -0.2 -0.2 0.1 0.1 -0.2 -0.2 -0.2 0.5 0.3 -0.1 -0.1 0 -0.8 0.6 0.4 0.5 0.1 -0.2 -0.2
E 0.4 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 -0.2 -0.5 0.7 0.3 0.5 -0.4 0.2 -0.2 0.3 -0.1 -0.1
K -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 0.2 0.4 -0.2 1.1 -0.1 0.1 0.1 -0.2 -0.1 -0.1
R 0 0 0 0 0 0 0 0 0.2 -0.1 0 0 0 0.2 -0.1 -0.1 -0.1 0 0 0
H 0 0 0 0 0 0 0 0 -0.1 0.6 -0.1 0 0 0.1 -0.1 0.1 -0.1 -0.1 0 0
N -0.2 -0.1 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 -0.4 -0.3 -0.2 0.9 1.1 0.1 0 -0.3 -0.1 -0.1
Q -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.7 -0.4 0.6 0.1 0.5 0.2 -0.1 -0.8 0 0.1 -0.1 -0.1
S -0.1 0.4 -0.1 -0.1 -0.1 0 0 0 0.1 0.4 0.2 -0.2 -0.1 0 -0.2 0.3 0 0.5 0 0
T -0.1 0 0 0 0 0 0 0 0 0.2 0.3 -0.1 -0.1 -0.2 0.6 0.5 -0.2 -0.1 0 0
G -0.1 -0.1 0 -0.1 -0.1 0 0 0 0.3 1.8 -0.3 -0.1 -0.1 -0.5 0.1 0.5 -0.3 0.1 0 0
P 0.5 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 1.2 -0.2 0.2 -0.2 -0.2 -0.9 -0.1 0.2 0.1 -0.3 -0.1 -0.1
C 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 -0.1 0 -0.1 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0163 0.2 -0.7 -1.1 -0.6 -0.7 -1.1 -1.1 -0.9 0.9 1.2 1.3 -0.5 -0.1 1.1 0.9 0.9 0.1 1 0.5 -1.1
0164 -0.6 -1.1 -1.2 -1.2 -1 -1.3 -1.3 -1.3 3.1 2.5 0.4 -0.1 -0.7 1.9 0.9 2 0.2 -0.1 -1.3 -1.3
Select residue pair below:
i_j Score Prob
0091_0163 2.404 1.00
0160_0163 0.814 0.77
0163_0166 0.499 0.28
Local Interactions:
i_j Score Prob
0163_0164 0.920 0.87
0162_0163 0.870 0.83
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.5172 seconds.