May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0162] and [P:0163]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 0 0 0.1 0 0 0 -0.1 0.5 -0.2 0 0 -0.2 -0.2 -0.1 0.4 -0.2 0.1 0
F 0.3 -0.1 0 -0.1 -0.1 0 0 0 0.6 0.6 -0.3 0.1 0.2 0.5 0.1 -0.5 -0.3 -0.3 -0.2 0
I -0.3 -0.1 0 -0.2 -0.2 0 0 -0.1 0.6 0.1 0.7 0.1 0.3 0.6 0 -0.2 -0.2 -0.2 -0.4 -0.1
L 0.4 -0.3 -0.3 -0.6 0.3 -0.3 -0.3 -0.4 0.5 -0.2 0.2 -0.4 -0.5 0 0.2 0.2 0.3 0.3 1.1 -0.2
V -0.7 -0.1 0 -0.1 -0.1 0 0 0 0.3 0.2 0.7 -0.1 0.3 0.1 -0.1 -0.1 -0.4 0.2 0.3 0
M 0.3 -0.1 0 -0.1 -0.1 0 0 0 0.2 0.6 0.1 -0.1 -0.1 -0.1 0.2 -0.3 0.1 -0.3 -0.1 0
W 0 0 0 0.4 0 0 0 0 -0.3 -0.1 -0.1 0 0 -0.1 -0.1 -0.1 0 0.4 -0.1 0
Y -0.2 0.3 -0.1 0.7 -0.2 -0.1 -0.1 -0.1 -0.6 0.6 0.7 0.1 0 0.4 1 -0.2 -0.2 -0.3 -0.6 -0.1
D 0.2 0 0 0 0 0 0 0 -0.2 -0.4 -0.3 0 -0.1 -0.1 -0.2 -0.2 -0.1 -0.2 1.6 0
E 0.3 0 0 0 0 0 0 0 -0.3 -0.2 0.3 0 0 -0.1 -0.1 0.5 -0.1 -0.2 -0.1 0
K -0.1 0 0 0 0.1 0 0 0 0.8 -0.1 -0.2 0 -0.1 -0.3 0.1 0.1 -0.1 0.2 -0.4 0
R 0.1 0 0 -0.1 -0.1 0 0 0 -0.1 0 -0.6 -0.1 0.1 0.3 0.1 0.8 0.8 -0.3 -0.7 0
H 0 0 0 0 0 0 0 0 -0.2 -0.1 -0.1 0 0 -0.1 -0.1 -0.1 0 0.5 -0.1 0
N 0 0 0 0 0 0 0 0 -0.2 -0.1 0.4 0 0 -0.1 -0.1 0 0 -0.1 -0.1 0
Q 0 0 0 0 0 0 0 0 0.2 -0.2 -0.1 0 0 -0.2 -0.1 0.4 0 -0.1 -0.1 0
S -0.1 0 0 0 0.1 0 0 0.4 0.1 -0.1 -0.1 0 0 -0.1 -0.1 -0.1 0 -0.1 -0.1 0
T 0.2 0 0 0 0 0 0 -0.1 -0.2 -0.5 -0.3 0.2 -0.1 0.2 -0.2 0 -0.1 1.1 0.2 0
G 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0162 -0.1 0.6 1.1 1.3 1.1 0.6 -0.5 0.6 -0.5 -0.1 0 0.4 -0.6 -0.6 -0.5 -0.4 0.5 -0.8 -0.8 -0.8
0163 0.2 -0.7 -1.1 -0.6 -0.7 -1.1 -1.1 -0.9 0.9 1.2 1.3 -0.5 -0.1 1.1 0.9 0.9 0.1 1 0.5 -1.1
Select residue pair below:
i_j Score Prob
0162_0168 0.839 0.80
0162_0180 0.623 0.48
0162_0170 0.523 0.31
0162_0165 0.497 0.28
Local Interactions:
i_j Score Prob
0162_0163 0.870 0.83
0161_0162 0.578 0.40
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.0124 seconds.