May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [P:0159] and [A:0178]
- A F I L V M W Y D E K R H N Q S T G P C
A 1.2 -0.2 0.6 0.9 0.3 -0.2 -0.2 -0.6 -0.3 -0.1 0.2 0.2 -0.3 0 -0.1 0 -0.6 0 0 -0.1
F -0.4 -0.1 -0.2 -0.1 -0.1 0 0 -0.1 0 0 0 0 0 0.9 -0.1 0.3 -0.1 0.2 0 0
I 0.7 -0.1 -0.3 -0.2 -0.2 0 0 -0.1 -0.1 0 -0.1 0 0 0.5 -0.1 0.5 -0.1 0.1 -0.1 0
L 0.1 -0.2 -0.3 0.1 -0.3 0.4 -0.1 -0.1 0.4 0 0.3 -0.1 -0.1 -0.4 0.2 0.4 -0.1 0.2 0 0
V 0.9 -0.3 -0.1 -0.6 -0.4 -0.1 -0.1 -0.3 -0.3 -0.1 -0.3 -0.1 0.2 0 -0.1 0.1 0 2.1 0 -0.1
M -0.7 0.2 -0.2 -0.1 -0.1 0 0 0.6 -0.1 0 0 0 -0.1 0.1 0.9 -0.4 -0.1 0.1 0 0
W -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
Y -0.3 1.6 -0.3 -0.2 0.1 0 -0.1 0.6 -0.1 0 -0.1 -0.1 0.1 0.1 -0.2 -0.3 -0.2 -0.4 -0.1 0
D -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
E -0.5 0 -0.1 -0.1 0.4 0 0 0 0 0 0 0 0 -0.1 0.4 -0.1 0 -0.1 0 0
K -0.4 0 -0.1 -0.1 0 0 0 0.4 0 0 0 0 0 -0.1 0 0.3 0 -0.1 0 0
R -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
H -0.3 0.4 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 -0.1 0 0
N -0.4 -0.1 0.2 1.3 0.1 0 0 -0.1 -0.1 0 -0.1 0 0 -0.2 -0.1 -0.1 -0.1 -0.3 0 0
Q 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
S 0.8 -0.2 0.3 0.4 -0.1 -0.1 -0.1 -0.2 0.3 0 -0.1 -0.1 0.1 -0.5 -0.2 -0.1 0.4 -0.2 -0.1 0
T 0.5 -0.3 0.8 -0.1 0.4 -0.1 -0.1 -0.2 -0.1 0 0.7 0.3 -0.2 -0.1 0.4 -0.6 -0.3 -0.8 -0.1 0
G 0.1 -0.3 0.3 -0.3 0 -0.1 0.8 -0.1 0 0 -0.1 -0.1 -0.1 -0.4 -0.2 0.9 0.5 -0.5 -0.1 0
P 1.4 -0.1 0.2 -0.6 0.4 -0.4 -0.5 0.2 0 -0.3 -0.8 -0.4 0.1 0.4 -0.7 0.8 0.6 0.6 -0.1 -0.3
C -0.3 0 -0.1 0 0 0 0 0 0 0 0 0 0 0.4 0 -0.1 0 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0159 1.4 0.1 0.6 0.6 1.3 0.1 -0.9 0.3 -0.9 -0.5 -0.5 -0.9 -0.7 0 -0.7 0.6 0.4 0.6 0.9 -0.7
0178 3.4 0.3 1 0.7 0.6 -1.2 -1 -0.2 -0.8 -1.4 -0.5 -0.9 -0.6 1.1 0.1 1.9 0 1.4 -1 -1.4
Select residue pair below:
i_j Score Prob
0159_0178 0.608 0.45
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.0135 seconds.