May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

GREMLIN_4ote Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [P:0159] and [Y:0174]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0.7 0.5 -0.2 1 1.1 -1.1 0.8 -0.2 -0.2 -0.6 -0.4 -0.5 1.2 -0.5 -0.4 0 -0.1 0.1 -0.1
F -0.1 0.4 -0.1 0.1 -0.1 -0.1 0 0.1 0.2 0 -0.1 0 -0.1 -0.1 -0.1 -0.1 0.3 0 0 0
I 0.2 -0.8 -0.1 1 0.3 -0.1 0.5 -0.4 -0.1 -0.1 1.1 -0.1 -0.4 -0.1 -0.2 -0.1 -0.1 0 0 0
L -0.1 -0.3 -0.2 0.4 -0.2 -0.1 -0.2 0.2 -0.1 0 0.1 0.7 0.1 -0.1 0.5 -0.1 -0.1 0 0 0
V -0.4 0.6 -0.5 0.3 -0.5 -0.5 -0.3 -0.1 0 0.3 0 0.1 1.2 -0.4 0.5 0.2 0.3 -0.1 -0.1 -0.1
M 0.8 0.4 -0.1 -0.2 -0.1 -0.1 -0.1 -0.6 0 0 -0.1 0 -0.1 0.4 -0.1 0 -0.1 0 0 0
W 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.2 0 -0.2 0.4 -0.3 -0.1 -0.2 0.4 0.7 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 0.3 0 0 0
D 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
E 0.4 0.2 -0.1 -0.1 -0.1 0 0 -0.3 0 0 0 0 -0.1 0 0 0 0 0 0 0
K 0 -0.2 0 0.2 -0.1 0 0 -0.2 0 0 0 0 -0.1 0 -0.1 0.4 -0.1 0 0 0
R 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0.2 0 0 -0.1 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
N -0.1 -0.4 0.1 -0.3 -0.2 -0.1 -0.1 0.3 -0.1 0 0.7 -0.1 0.7 -0.1 -0.3 0.4 -0.1 0 0 0
Q 0 -0.2 0 0 0 0 0 -0.3 0.5 0 0 0 0 0 0 0 0 0 0 0
S -0.2 -0.1 -0.3 0.2 -0.1 1 -0.2 1 -0.1 -0.1 0 -0.1 0 -0.1 -0.3 -0.2 0.1 0 0 0
T -0.1 1 0 -0.3 -0.4 -0.2 -0.3 0 -0.1 0 -0.1 0.7 0 0.2 -0.2 -0.1 -0.2 0 0 0
G -0.1 -0.5 0 0 0 -0.2 2.2 -0.5 -0.2 0 -0.1 -0.1 -0.2 -0.1 0.6 -0.2 -0.1 0 0 0
P 0.2 0.3 1.4 -0.8 1.2 -0.3 0 0.7 -0.3 -0.3 -0.6 -0.5 -0.1 -0.7 0.4 0.3 0 -0.2 -0.3 -0.2
C 0 -0.2 0 0 0 0 0 0.1 0 0 0 0 0 0 0 0 0 0 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0159 1.4 0.1 0.6 0.6 1.3 0.1 -0.9 0.3 -0.9 -0.5 -0.5 -0.9 -0.7 0 -0.7 0.6 0.4 0.6 0.9 -0.7
0174 0.2 1 0.5 0.9 0.5 0.1 0.2 1.1 0 -0.8 0 -0.3 0.4 -0.2 0.1 -0.3 0.3 -1.1 -1 -1.1
Select residue pair below:
i_j Score Prob
0156_0174 0.678 0.57
0159_0174 0.559 0.37
0044_0174 0.523 0.31
Local Interactions:
i_j Score Prob
0173_0174 0.887 0.85
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...

Page generated in 0.0183 seconds.