May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

GREMLIN_4ote Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [Q:0157] and [S:0161]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 -0.1 -0.4 -0.2 -0.3 0.5 0 -0.1 0.4 -0.1 -0.1 -0.1 -0.1 -0.3 1.1 -0.2 0.1 -0.1 0 0
F -0.4 0.1 -0.3 0 -0.3 0.2 0 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.3 0.7 0.6 0.8 0 0
I 0.2 -0.2 0.5 0.4 -0.7 -0.3 0 -0.1 0.2 0.3 -0.1 -0.2 -0.1 0.5 0.2 0.6 -0.6 -0.1 0 0
L 0.1 0.5 0.2 0.6 -0.1 0.7 -0.1 -0.1 0.4 -0.3 -0.3 -0.4 -0.3 0.6 -0.7 0.5 0.5 -0.4 -0.2 -0.1
V 0.4 -0.1 -0.3 -0.4 -0.1 -0.2 0 -0.1 -0.1 0 0.4 -0.1 -0.1 0.2 -0.3 0.7 0.2 -0.1 0 0
M -0.1 0.2 -0.3 -0.1 0.2 1.3 0 0.5 -0.1 -0.1 -0.2 -0.3 -0.1 -0.4 0.3 -0.1 0.3 -0.2 -0.1 0
W -0.2 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0
Y 0.1 -0.1 0.1 -0.2 0.2 -0.1 0 0 0 0 0 -0.1 0 -0.1 -0.1 -0.1 0.3 0 0 0
D -0.5 0.2 0.2 -0.2 0.3 -0.1 0 0.2 0 0 -0.1 0 0 -0.1 -0.1 -0.3 -0.3 0 0 0
E 0 0 -0.1 -0.2 -0.3 -0.1 0 0 0.4 0 0 0.4 0 -0.1 -0.2 0.1 -0.2 0 0 0
K 0.3 0.2 -0.1 -0.2 -0.3 -0.1 0 0 -0.1 0 0 0 0 -0.1 -0.2 0.6 0 0 0 0
R 0.1 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 -0.1 -0.2 -0.1 0 0 0
H 0.4 0 -0.1 -0.2 0 0.1 0 0 0 0 0.3 0 0 -0.1 -0.1 -0.1 -0.4 0 0 0
N 0.2 0.1 0 0.9 0.1 -0.4 0 -0.2 -0.2 0.7 -0.3 -0.2 -0.1 -0.1 -0.3 -0.3 0.2 0.6 0 0
Q 0.5 -0.5 0 -0.4 0.3 -0.8 -0.2 -0.2 -0.5 -0.1 0.6 1.1 0.5 0.1 0.3 1 0.4 -0.3 -0.3 -0.2
S 0.1 0.1 0.6 0.4 0.7 -0.4 0 0.2 -0.1 -0.1 0.2 -0.2 -0.1 -0.4 0.5 -0.8 0.5 -0.2 -0.1 0
T -0.3 -0.2 0.8 0.2 1.3 -0.3 -0.1 0.2 -0.2 -0.2 -0.2 -0.3 0.5 0 0.2 -0.6 -0.4 -0.3 0.4 -0.1
G -0.2 0 -0.1 0.3 -0.2 -0.1 0 0 0 0 0 0 0 0.3 0.2 -0.4 -0.4 0.4 0 0
P -0.2 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0
C -0.2 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0157 0.2 0.3 0.7 1.9 0.2 1.1 -1.5 -0.7 -0.6 -0.7 -0.5 -1.3 -0.6 1.2 2.8 1.2 1.1 -0.6 -1.5 -1.5
0161 1.2 0.1 0.9 0.8 0.5 -0.1 -1 -0.2 -0.2 -0.3 0 -0.5 -0.3 0.5 0.2 0.6 0.7 -0.3 -0.9 -1
Select residue pair below:
i_j Score Prob
0106_0161 1.307 0.99
0153_0161 0.910 0.87
0161_0164 0.806 0.76
0157_0161 0.687 0.58
0151_0161 0.671 0.56
Local Interactions:
i_j Score Prob
0161_0162 0.578 0.40
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...

Page generated in 0.0246 seconds.