May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [I:0148] and [A:0167]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.1 -0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0.3 0 0
F -0.1 -0.3 0.2 0.2 0.1 0.5 -0.1 0.2 0 0 0 0 0 0 0 0 0.1 -0.6 -0.1 0.5
I 0.6 1.2 -0.9 -0.2 0.4 -0.3 -0.5 0.5 -0.1 -0.1 0 0 0 0 0 -0.1 -0.1 0.2 0.1 0.2
L 0.3 0.1 0.1 0.4 0.1 -0.1 0.6 -0.1 0.1 0 -0.2 -0.2 -0.2 -0.2 -0.2 -0.1 -0.1 0.3 -0.9 -0.4
V 0.3 0.9 -0.2 -0.6 -0.4 -0.4 -0.1 0.3 0 -0.1 0 0 0 0 0 -0.1 -0.1 1 0.8 -0.2
M 0.2 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0.1 -0.1 0.4 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
Y -0.2 -0.6 0.7 0.7 0.1 0.6 0 -0.3 0 0 0 0 0 0 0 0 0 -0.5 0 -0.1
D -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K -0.1 0 -0.1 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H -0.2 -0.1 0 -0.1 0.4 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
N -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G -0.1 0 0.3 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P -0.1 -0.1 -0.1 0.7 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 -0.1 0 0
C -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0148 0.1 0.7 1.1 -0.4 1.8 -0.1 -0.1 0.3 -0.4 -0.4 -0.2 -0.4 -0.2 -0.4 -0.4 -0.4 -0.4 -0.1 0.2 -0.4
0167 -0.1 1.7 0.8 0.7 1.2 0.5 -0.2 0.5 -0.4 -0.4 -0.6 -0.6 -0.6 -0.6 -0.6 -0.5 -0.4 0.2 -0.3 -0.1
Select residue pair below:
i_j Score Prob
0105_0167 2.330 1.00
0099_0167 1.749 1.00
0088_0167 1.731 1.00
0167_0187 1.003 0.93
0093_0167 0.748 0.68
0126_0167 0.711 0.62
0148_0167 0.660 0.54
0100_0167 0.509 0.29
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.0155 seconds.