May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [S:0137] and [P:0138]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.2 -0.3 -0.3 0.2 0 0 0 0.2 -0.1 0.4 -0.1 0 0 0.4 0.3 -0.3 0 0.4 0
F 0 0 -0.1 -0.1 -0.2 0 0 0 0 -0.1 0 0 0 0.5 0 0 -0.1 0 -0.1 0
I 0.3 -0.1 -0.3 -0.6 0 0 0 0 -0.1 0.6 0.2 0 0 0 -0.1 0.4 -0.3 0 -0.1 0
L -0.1 -0.1 -0.1 -0.8 -0.6 0 0 0 1.3 0.1 0 -0.1 0 0 0.2 -0.1 0.7 0 -0.3 0
V 0.2 -0.2 -0.6 -0.7 -0.3 -0.1 0 0 -0.2 0.2 0.4 -0.1 0 0 0.1 -0.1 0 0 0 0
M 0 0 0.4 -0.1 -0.2 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1 0 -0.1 0
W 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0
Y 0 0 -0.1 -0.1 -0.2 0 0 0 0.4 -0.1 -0.1 0 0 0 0 0 -0.1 0 -0.1 0
D -0.2 0.3 0 0.6 -0.1 -0.1 0 0 -0.2 -0.3 0.1 -0.1 0 -0.1 -0.2 -0.1 0 0 0.3 0
E -0.2 -0.3 0.6 -0.1 0.6 0.4 0 0 -0.1 -0.3 -0.3 -0.1 0 0 0.2 -0.1 -0.1 0 -0.2 0
K -0.3 0.2 0 0.6 -0.3 -0.1 0 0.4 -0.2 -0.1 0 0.6 0 -0.1 -0.4 -0.2 -0.5 0 -0.1 0
R -0.1 0.2 0.9 -0.2 0.7 0 0 0 -0.1 -0.2 -0.2 -0.1 0 0 -0.2 -0.1 -0.1 0 -0.4 0
H 0 0 -0.1 -0.3 -0.2 0 0 0 -0.1 0.3 -0.1 0 0 0 -0.1 0 0.9 0 -0.2 0
N -0.2 0.9 0.2 0.9 0.3 -0.1 0 0 -0.2 0.2 -0.2 -0.1 0 -0.1 -0.1 -0.1 -0.1 0 -0.3 0
Q -0.1 -0.2 0.1 0.8 0.2 0 0 0 -0.1 -0.3 -0.2 0 0 0 -0.1 0 -0.3 0 0.1 0
S -0.1 0.2 0.2 0.4 0.2 0.1 -0.1 -0.2 0.2 0.7 0.2 0.1 -0.1 0.1 0.6 -0.4 -0.2 -0.1 0.3 -0.1
T 0.7 0 0.2 0 0.4 -0.2 -0.3 -0.5 -0.3 0.3 0.4 0 -0.1 -0.5 0.3 0.7 0.2 -0.1 1.1 -0.3
G 0.1 -0.6 0.1 1.2 0.6 -0.1 0 0 -0.2 0 -0.5 -0.1 0 -0.1 -0.3 -0.1 0.7 0 0.3 0
P 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0
C 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0137 0.4 -0.9 -0.2 0.1 0.2 -0.9 -1.1 -0.9 0.8 -0.2 0.6 -0.3 -0.7 0.9 -0.5 1.9 2.1 0.9 -1.1 -1.1
0138 0 -0.3 1 1.4 1.5 -0.6 -1.1 -0.9 0.3 1.1 0.3 -0.2 -1 -0.8 0.1 -0.4 1.2 -0.9 0.2 -1.1
Select residue pair below:
i_j Score Prob
0137_0140 0.930 0.88
0114_0137 0.512 0.30
Local Interactions:
i_j Score Prob
0137_0139 1.081 0.95
0137_0138 0.525 0.32
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.0641 seconds.