May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [C:0114] and [P:0138]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.6 -0.2 -0.4 -0.4 0.2 -0.1 0 0 0.1 0.7 -0.1 0.1 -0.1 -0.1 -0.3 0.1 0.1 -0.1 0 0
F 1 -0.5 0.2 0.3 0.1 -0.1 0 0 0.1 -0.2 0.6 -0.1 0 0 -0.1 -0.1 -0.1 0 -0.6 0
I -0.2 0.2 -0.5 0.6 -0.8 0.2 0 0 -0.1 0 0.2 -0.1 0 0 1.1 -0.1 0 0 -0.3 0
L -0.3 -0.5 -0.2 0.6 0.5 0.4 -0.1 -0.1 -0.5 0.7 -0.7 0.1 -0.1 0.2 -0.5 0.9 0.5 -0.1 -0.1 -0.1
V 0.1 -0.1 0 -0.2 0.3 0 0 0 -0.1 0.1 0.1 0.4 0 0 0.1 -0.1 -0.3 0 -0.3 0
M 0.3 -0.3 0 0.8 -0.3 -0.1 0 0 0.2 -0.8 0.3 -0.1 0 -0.1 0 0.3 0.1 0 -0.6 0
W 0.2 2.1 -0.5 -0.8 -0.3 0 0 0 -0.1 0.3 -0.1 0 0 0 0 -0.1 -0.3 0 -0.3 0
Y -0.2 1.8 -0.4 -0.7 -0.4 0 0 0 0.3 0.2 0.2 0 0 0 -0.2 -0.1 0 0 -0.1 0
D -0.1 0 -0.1 -0.1 0.2 0 0 0 0 -0.1 0 0 0 0 -0.1 0 -0.1 0 -0.1 0
E 0 -0.1 0.6 0.1 0.5 -0.4 -0.1 -0.1 0.4 -1.7 0.5 0 0.2 -0.2 -0.6 -0.6 0.7 -0.2 1.1 -0.1
K -0.1 0 0.2 -0.3 -0.2 0 0 0 -0.1 0.2 -0.2 0 0 0 0.2 0 -0.2 0 0.1 0
R -0.4 -0.3 0.3 0.1 0 -0.1 0 0 -0.1 -0.2 -0.2 -0.1 0 0 0.6 -0.2 0.3 0 0.3 0
H -0.1 -0.2 1.2 0.3 0.7 -0.1 0 0 -0.1 -0.4 -0.2 0.1 0 0 -0.4 -0.1 0.2 0 -0.4 0
N -0.4 -0.1 0.1 0.6 0.1 0 0 0 -0.1 -0.3 -0.4 -0.1 0 0 1.5 -0.1 -0.2 0 -0.7 0
Q -0.3 -0.7 0.6 0.9 0.2 0.4 -0.1 0.1 -0.2 -0.4 -0.3 -0.2 -0.2 0.1 -0.6 0 0.5 -0.1 1.3 -0.1
S 0.3 -0.2 -0.3 -0.4 0.1 -0.1 0 0 -0.1 0.9 -0.2 0.4 0 0 0.3 0 -0.6 0 0.1 0
T -0.4 -0.2 -0.2 -0.3 -0.5 0 0 -0.1 0.2 0 0.6 -0.2 -0.1 0.1 0.1 0 0.3 0.3 0.4 0
G -0.3 -0.5 0.2 -0.2 0.9 -0.3 -0.1 -0.1 0.3 0.8 0.2 -0.1 -0.1 -0.2 -0.9 0.1 -0.1 -0.1 0.6 -0.1
P 0 0 0 -0.1 -0.1 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 -0.1 0
C 0.3 -0.1 -0.2 0 -0.4 0 0 0 0 0.8 -0.2 0 0 0 -0.2 0 -0.2 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0114 -0.2 0.8 0.2 0.8 0.2 0.5 -0.1 -0.2 -0.9 0.9 -0.3 0.5 0.2 -0.6 1.6 -0.5 0.8 -1.2 -1 -0.6
0138 0 -0.3 1 1.4 1.5 -0.6 -1.1 -0.9 0.3 1.1 0.3 -0.2 -1 -0.8 0.1 -0.4 1.2 -0.9 0.2 -1.1
Select residue pair below:
i_j Score Prob
0138_0152 1.887 1.00
0114_0138 0.853 0.81
0138_0150 0.619 0.47
0138_0142 0.516 0.30
Local Interactions:
i_j Score Prob
0138_0139 0.564 0.38
0137_0138 0.525 0.32
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.0109 seconds.