May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [C:0114] and [S:0115]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.7 -0.1 -0.1 -0.2 0.2 -0.1 -0.1 -0.3 0.1 0.3 -0.1 -0.1 0.7 -0.2 0.5 0 -0.5 -0.5 -0.3 0
F 0.3 0 0 -0.1 0 0 0 -0.1 0 0.3 0 0 0 -0.1 -0.1 1.1 -0.2 -0.4 -0.1 0
I -0.6 0 0 -0.1 -0.1 0 0 -0.1 0.8 -0.1 0 0 0 -0.1 0.4 -0.4 0.6 0.1 -0.1 0
L 0.6 -0.2 -0.2 -0.1 -0.3 -0.2 0.3 0.2 -0.3 0.4 -0.1 0.1 -0.2 -0.2 0.3 0.7 -0.3 -0.3 0.4 -0.1
V -0.2 0 0 -0.1 0 0 0 -0.1 0.8 -0.1 0 0 0 -0.1 -0.1 -0.2 0.2 0.1 -0.1 0
M -0.2 -0.1 -0.1 0.2 -0.1 0.4 0 0.1 0.5 -0.2 0 -0.1 -0.1 -0.1 -0.1 0 0.5 -0.2 -0.2 0
W -0.8 0 0 -0.1 0 0 0 -0.1 -0.1 -0.1 0 0 0 -0.1 0 -0.4 -0.1 0.6 1.2 0
Y -0.1 0 0 -0.1 0 0 0 -0.1 -0.1 -0.1 0 0 0 -0.1 -0.1 0 0.3 0.5 -0.1 0
D -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.3 0 -0.4 0 0
E 0.4 -0.1 -0.3 0.4 -0.4 0.2 -0.3 1.6 -0.1 -0.5 0.3 0 -0.3 0.3 0 0.3 0.2 -0.2 -0.6 -0.2
K 0.3 0 0.4 0 0 0 0 -0.1 -0.1 -0.1 0 0 0 -0.1 0 0.4 -0.1 -0.6 -0.1 0
R 0 0 -0.1 -0.1 -0.1 0 0 -0.2 -0.3 -0.1 0 -0.1 -0.1 0.7 -0.1 0.3 0.3 0 0.2 0
H -0.4 0 0.4 -0.1 0 0 0 -0.1 -0.2 -0.1 0 0 0 -0.1 0 -0.5 -0.2 1.2 0.2 0
N -0.3 0 0 -0.1 -0.1 0 0 -0.1 0.1 -0.1 0 0 0 -0.1 -0.1 0.9 -0.2 0 -0.1 0
Q 0.8 0.1 0 0.4 0.7 -0.2 -0.1 0 -0.2 0.9 -0.2 -0.3 0.2 -0.7 -0.4 -0.8 0.6 0.1 0.1 -0.1
S -0.2 -0.1 -0.1 -0.1 0.4 -0.1 0 -0.2 -0.3 0.3 0 -0.1 -0.1 -0.2 0.3 -0.6 0.6 0.4 -0.2 0
T 1.4 -0.1 -0.1 -0.1 -0.1 -0.1 0 0.1 -0.5 -0.2 0 -0.1 -0.1 -0.2 -0.1 0.2 -0.1 0.1 0.5 0
G 0.3 0.2 -0.2 0.1 -0.3 -0.2 -0.2 -0.6 0.3 -0.5 -0.1 0.2 -0.2 1.2 -0.4 -0.2 -0.7 1.2 -0.5 -0.1
P -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.2 0 0
C 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0.1 -0.1 0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0114 -0.2 0.8 0.2 0.8 0.2 0.5 -0.1 -0.2 -0.9 0.9 -0.3 0.5 0.2 -0.6 1.6 -0.5 0.8 -1.2 -1 -0.6
0115 3 -1 -0.9 -0.2 -0.5 -1 -1.2 -0.1 0.4 -0.3 -1.1 -1 -0.8 -0.1 -0.2 2.5 1 3.6 0.4 -1.4
Select residue pair below:
i_j Score Prob
0115_0119 0.739 0.67
Local Interactions:
i_j Score Prob
0114_0115 0.631 0.49
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.3114 seconds.