May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [P:0085] and [N:0198]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.1 -0.5 0 -0.4 -0.2 0 0 -0.1 -0.1 0 0 -0.1 0.7 -0.1 0.7 -0.1 -0.3 0 0.8
F 0 0 0.3 0.3 -0.1 -0.1 0 0 0 0 0 0 0 -0.3 0 0 0 -0.1 0 -0.1
I 0.4 -0.1 0.2 0 0.1 -0.1 0 0 -0.1 -0.1 0 0 0 -0.4 0.3 0.2 -0.1 0.1 0 -0.1
L 0 0 -0.1 0.1 0.7 -0.1 0 0 0 -0.1 0 0 0 -0.3 -0.1 -0.1 0 0.4 0 -0.1
V -0.1 -0.1 0.1 0.5 0.5 -0.2 0 0 -0.1 -0.1 0 0 0 -0.3 -0.1 0.3 -0.1 -0.3 0.4 -0.1
M 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 -0.2 0 0 0 0 0 0
Y 0 0 0.4 -0.2 0.3 -0.1 0 0 0 -0.1 0 0 0 0 0 -0.1 0 -0.1 0 -0.1
D 0 0 0.1 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 0 0 0 0.3 0 0
E 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 -0.2 0 0 0 0 0 0
K 0 -0.1 1.5 0.8 -0.1 -0.2 0 0 -0.1 -0.1 0 0 0 -0.5 -0.1 -0.2 -0.1 -0.3 0 -0.1
R -0.1 -0.1 -0.1 -0.1 1 1 0 0 -0.1 -0.2 0 0 -0.1 0.3 -0.1 -0.1 -0.1 -0.3 -0.1 -0.2
H 0 0 1.2 -0.2 -0.2 -0.1 0 0 0 -0.1 0 0 0 -0.3 0 -0.1 0 -0.1 0 0
N -0.1 0.3 0.8 -0.2 0.1 0.7 0 0 -0.1 -0.1 0 0 0 -0.8 0.2 -0.3 -0.1 0 -0.1 0.3
Q 0.2 0 -0.4 -0.2 0 -0.1 0 0 0 -0.1 0 0 0 0.2 0 -0.1 0.4 -0.1 0 -0.1
S -0.1 -0.1 -0.3 -0.2 -0.4 0.2 0 0 0 -0.1 0 0 0.4 0.2 0.3 -0.1 0.4 0.2 -0.1 -0.2
T 0 -0.1 0 0.2 0.1 0.2 0 0 0.4 -0.1 0 0 0 0.3 -0.1 -0.1 -0.1 -0.2 0 -0.1
G -0.1 -0.1 -1.1 -0.7 -0.6 0 0 0.3 -0.1 0.9 0 -0.1 -0.1 1.1 -0.2 0 -0.2 1.5 -0.1 -0.2
P -0.4 0.5 -0.8 0.9 0.1 -0.5 -0.2 -0.3 0 0.3 -0.2 0 -0.2 1.7 0 0.2 -0.1 -0.4 -0.3 0.6
C 0 0 0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 -0.2 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0085 0.6 -0.6 0.3 0 0.4 -1 -1.2 -0.4 -0.7 -1.2 0.4 0.8 -0.3 0.8 -0.2 0.5 0.3 0.8 2.8 -1
0198 -0.5 -0.3 1.7 0.9 1.2 0.3 -0.9 -0.7 -0.5 -0.1 -0.9 -0.8 -0.6 1.4 -0.3 0 -0.3 0.3 -0.7 0.3
Select residue pair below:
i_j Score Prob
0085_0171 0.596 0.43
0085_0198 0.568 0.38
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.0204 seconds.