May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [A:0077] and [Q:0216]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.3 -0.2 0.5 0 0.2 0 -0.1 -0.3 -0.1 0.4 0.1 0 0 0.2 -0.1 -0.2 0.2 0.2 -0.1 0.4
F -0.3 0 -0.1 0.2 -0.4 0 0 -0.1 -0.1 -0.1 0.1 -0.1 0.4 -0.1 0.9 -0.1 -0.1 -0.1 0 0
I 0.5 0 0.2 0.1 0.2 -0.1 0 -0.1 -0.3 -0.3 0.7 -0.2 -0.1 -0.2 -0.2 -0.1 0.3 -0.1 0 0
L 0.4 0 -0.2 -0.2 0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 -0.1 0.9 -0.1 -0.1 0 0
V 0.5 -0.1 -0.1 0.1 0.2 -0.5 0 0.5 -0.3 -0.1 0.2 0.3 -0.1 -0.2 0 0.6 -0.5 0.3 0 -0.1
M 0.3 0 0 -0.3 -0.8 -0.1 0 -0.1 -0.1 -0.1 0.1 -0.1 0 0.7 -0.2 -0.1 0.5 0.2 0 0
W 0.2 0 -0.3 0 -0.1 -0.1 0 0 -0.1 -0.2 -0.1 -0.1 0 -0.1 -0.1 0.1 -0.2 1 0 0
Y 0.2 -0.1 -0.5 -0.2 -0.8 -0.2 0 -0.1 0.2 -0.4 -0.3 -0.1 -0.1 0.4 0 0.7 1.1 0 0 -0.1
D 0 0 0.3 0.1 0.2 0 0 -0.1 -0.2 0.1 0.2 0 -0.1 -0.1 0.1 -0.1 0.1 -0.3 0 0
E 0.2 -0.1 0 0 0.2 -0.3 0 -0.1 -0.3 -0.1 0.6 0.3 -0.1 -0.2 0.4 -0.2 0.1 -0.2 0 0
K -0.1 -0.1 -0.5 -0.1 -0.1 -0.3 0 -0.2 0.7 0.6 -0.1 0.1 0.3 -0.3 0.4 -0.1 0.3 -0.3 0 0
R -0.3 0 -0.3 -0.1 0.1 -0.1 0 0 -0.1 1 -0.2 0 0 0 -0.1 0 -0.1 0 0 0
H -0.3 0 -0.3 -0.2 -0.6 -0.2 0 -0.1 1.2 0.3 -0.1 0 0 0.4 -0.1 -0.1 -0.1 -0.1 0 0
N -0.5 0.3 0.5 0.4 0.5 0.8 0 0.2 -0.5 0 0 -0.2 -0.2 -0.2 -0.3 -0.2 -0.3 -0.2 0 -0.1
Q -0.3 0 -0.4 -0.2 -0.3 0 0 0 0.2 0.8 0.1 -0.1 0 0.3 0.3 -0.1 -0.2 0.1 0 0
S -0.3 0.3 0.4 1 0.1 1.4 -0.1 0.9 -0.6 -0.3 0.1 0.5 -0.1 -0.2 -0.5 -0.4 -0.9 -0.9 -0.1 -0.2
T 0 0 0.1 0 0.8 -0.2 0 0.3 0.2 -0.2 0.2 -0.1 0 -0.1 -0.2 -0.1 -0.2 -0.2 0 0
G -0.6 -0.1 0.7 0 1 -0.3 0 -0.1 0.3 -0.4 0 -0.2 -0.1 0.1 0 -0.1 0 -0.2 0 -0.1
P 0.7 -0.2 -0.1 -0.3 0.2 0.3 -0.1 -0.5 0.1 -0.3 -0.5 0.2 0.1 -0.1 0.2 -0.2 -0.1 0.8 -0.1 -0.2
C -0.1 0 0.1 0 -0.2 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0077 1.2 -0.2 0.4 -0.3 1 -0.3 -0.6 -0.3 -0.1 0.1 0.1 -0.6 -0.3 -0.2 0.2 0 0.3 0.5 0.7 -1
0216 0.8 -0.8 1 0.2 0.6 -0.2 -1 -0.2 -0.2 0.4 1.3 0.1 -0.3 0.1 0.5 -0.2 0.5 -0.4 -1 -0.9
Select residue pair below:
i_j Score Prob
0200_0216 1.664 1.00
0216_0220 1.535 1.00
0078_0216 1.099 0.96
0081_0216 0.900 0.86
0079_0216 0.763 0.70
0077_0216 0.743 0.67
0213_0216 0.521 0.31
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.029 seconds.