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Coupling matrix for [A:0077] and [G:0078]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.9 0.6 0.5 0.5 0 0.2 -0.2 0 0.2 0 -0.3 -0.1 -0.1 -0.3 0 0.4 0 0.8 -0.1 -0.3
F -0.4 -0.1 0.4 -0.4 0.2 0 0 0 0 0 0 0 0 0 0 0.4 0.2 -0.1 0 0
I 1.2 -0.1 -0.2 0.3 -0.3 -0.1 0 -0.1 0 0 -0.1 0 0 -0.1 0.4 -0.1 -0.3 -0.2 0 0
L 0 -0.1 -0.4 0 0.3 0 0 -0.1 0 0.1 0 0 0 0 0 0 -0.2 -0.1 0 0.4
V 1 -0.5 -0.8 -0.1 -0.3 -0.1 0.4 -0.3 -0.1 -0.1 0.9 0 0 0.6 -0.1 -0.1 0.2 -0.2 -0.1 -0.1
M -0.1 -0.1 0.2 0.1 0.3 0 0 -0.1 0 0 -0.1 0 0 0 0 0 -0.1 -0.1 0 0
W -0.5 -0.2 0 -0.4 0.1 0.3 0 0 0 0 0 0 0 0 0 0 0.7 -0.1 0 0
Y -0.9 0.2 0.4 -0.4 -0.2 -0.1 0 -0.1 -0.1 0 -0.1 0 0 -0.1 0 -0.1 1.4 -0.2 0 0.2
D 0.5 -0.2 -0.1 0 0.3 0 0 -0.1 0 0 0 0 0 0.4 0 -0.1 -0.4 -0.2 0 0
E 0.4 -0.3 0.1 0.1 0.6 -0.1 0 -0.1 -0.1 -0.1 0 0 0 -0.1 0 -0.1 0 -0.2 0 -0.1
K -0.1 -0.2 -0.5 0.1 0.5 -0.1 -0.1 0.2 0 0 -0.1 0 0 0.3 0 0.2 0.5 -0.3 0 -0.1
R -0.4 -0.1 -0.1 -0.3 0.2 0 0 0.4 0 0 0 0 0 0 0 0 -0.1 0.1 0 0
H -0.5 0.6 -0.5 -0.1 -0.8 -0.1 0 0.2 0 0 0 0 0 0 0 0 -0.1 1.3 0 0
N 1.1 -0.1 -0.2 0.3 -0.1 0.2 -0.1 -0.3 -0.1 0 0.3 0 0 -0.1 -0.1 -0.1 -0.6 0 0.1 -0.1
Q 0.5 -0.1 -0.3 0 0.5 0 0 -0.1 0 0 0 0 0 0 0 0 0 -0.1 0 0
S 1 -0.1 1.1 0.2 0.6 0.1 -0.1 0.1 -0.1 -0.1 -0.2 -0.1 -0.1 -0.2 -0.2 -0.2 -0.8 -0.5 -0.1 -0.3
T 0.2 -0.2 0.1 0.5 -0.5 0 0 0.1 0.4 0 0 0 0 0 0 0 0.1 -0.1 0 0
G -0.9 1 0.7 0.3 -0.3 -0.1 0 -0.2 -0.1 0 -0.1 0 0 -0.1 0 -0.1 0.1 0.3 0 -0.1
P -0.9 0.3 0.9 0.4 0.4 -0.2 -0.1 0.7 -0.2 -0.1 -0.2 -0.1 -0.1 -0.2 0.1 -0.2 0 0.1 -0.1 0.4
C 0.1 0 -0.1 -0.1 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0077 1.2 -0.2 0.4 -0.3 1 -0.3 -0.6 -0.3 -0.1 0.1 0.1 -0.6 -0.3 -0.2 0.2 0 0.3 0.5 0.7 -1
0078 0.7 0.2 1.9 1.6 2.1 -0.3 -0.8 0.5 -0.6 -0.9 -0.3 -0.9 -0.9 -0.2 -0.6 -0.5 0.6 0.2 -0.9 -0.4
Select residue pair below:
i_j Score Prob
0078_0212 2.361 1.00
0078_0216 1.099 0.96
0078_0202 0.890 0.85
0078_0201 0.507 0.29
Local Interactions:
i_j Score Prob
0077_0078 0.878 0.84
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
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