May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [M:0076] and [T:0204]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 -0.1 -0.2 -0.2 -0.4 -0.1 -0.1 -0.1 0.3 0.6 0 -0.3 0.1 -0.1 0.8 0.6 -0.1 0.1 -0.6 -0.1
F -0.1 0 0 0 0 0 0 0 0.2 0 -0.1 0 0 0 0 -0.1 -0.1 0 -0.1 0
I -0.3 0 -0.1 0.3 -0.1 0 0 -0.1 -0.4 -0.1 -0.1 0.3 -0.1 0.2 0.1 -0.2 -0.3 0.3 0.7 0
L 0.4 0 0 0 0 0 0 0 -0.1 -0.3 0 0.2 0 -0.1 -0.1 0.2 -0.1 -0.1 -0.2 0
V 0.2 -0.3 -0.1 -0.5 -0.4 -0.2 -0.2 0 0.1 0.8 0.5 0.9 -0.5 0 0.5 -0.2 -0.7 -0.2 0.8 -0.2
M -0.1 0 0 0 0 0 0 0 -0.1 -0.1 -0.2 0.3 0 -0.1 0.1 0 0.5 0.1 -0.3 0
W -0.1 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 -0.1 -0.1 0 0 0
Y -0.4 0 0 0 0 0 0 0 -0.1 0.6 -0.3 0 0 -0.1 0.2 -0.3 0.2 -0.1 0.1 0
D 0.2 0 0 0 0.4 0 0 0 -0.1 -0.5 0.6 -0.1 0 -0.1 -0.2 0.7 -0.2 -0.1 -0.3 0
E 0.6 -0.1 -0.2 -0.1 0.1 0 0 -0.1 -0.5 -0.3 0.9 0.3 -0.1 -0.4 -0.5 0.8 -0.3 -0.1 0.4 0
K -0.1 0 -0.1 -0.1 -0.1 0 0 0 0.6 0.5 -0.3 -0.2 -0.1 0 -0.5 0.3 -0.2 0.2 0 0
R 0.1 0 0 0 0 0 0 0 -0.1 0.2 0 -0.1 0 -0.1 0.3 0 -0.4 0.5 -0.3 0
H -0.1 0 0.2 0 0 0 0 0 0.1 0.8 -0.4 -0.1 0 -0.1 -0.2 -0.2 -0.2 0.4 0 0
N -0.1 0 0 0 0 0 0 0 0 -0.2 0 0 0 0 0 0.3 -0.1 0 -0.1 0
Q 0.1 0 0 -0.1 0.7 0 0 0 0.3 -0.7 0.6 -0.1 0.4 0 -0.3 -0.6 0.2 -0.1 -0.3 0
S -0.2 -0.1 -0.2 0.5 -0.2 0 0 -0.1 0.4 -0.7 -0.3 -0.4 -0.1 0 0.1 0 1.7 0.2 -0.1 0
T 0.2 0.1 0.3 -0.1 0.1 -0.1 -0.1 -0.1 -0.3 0.1 0 -0.4 0.1 0.6 0.2 0.1 1.3 -0.7 -0.2 -0.1
G -0.3 0 0 0 0 0 0 0 0.4 -0.1 0.6 -0.1 0 0 -0.1 -0.2 0.1 -0.1 -0.1 0
P -0.1 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 -0.1 -0.1 0 0 0
C -0.1 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 -0.1 -0.1 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0076 1.4 -0.9 0.1 -0.4 0.8 -0.1 -1 -0.4 0.2 1.1 0.3 -0.3 -0.1 -0.7 -0.1 1 1.1 -0.3 -1 -1
0204 1.6 -1.2 -0.9 -0.7 -0.5 -1.2 -1.2 -1.1 0.6 1.4 1.6 0.3 -0.9 -0.2 0.4 1.2 1.6 0.2 0.9 -1.2
Select residue pair below:
i_j Score Prob
0074_0204 2.835 1.00
0076_0204 2.013 1.00
0204_0207 1.207 0.98
0068_0204 0.951 0.90
Local Interactions:
i_j Score Prob
0204_0205 1.103 0.96
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.117 seconds.