May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [M:0076] and [A:0077]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 -0.3 0.7 -0.5 0.9 0.3 -0.3 -0.1 0.4 0 -0.1 -0.3 0.2 0.5 -0.4 0 -0.3 -0.2 0.1 -0.1
F -0.1 0 -0.1 0 0.1 0 0 0 0 -0.1 0 0 0 0 0 -0.1 0 0.1 -0.1 0
I -0.4 -0.2 -0.5 -0.2 0 0.1 -0.2 -0.5 0.4 0.2 0.8 -0.1 -0.2 0.2 -0.2 0.8 0.5 0.1 -0.2 0
L -0.2 0 0.3 0 0.1 0 0 -0.1 0.1 -0.1 -0.1 0 0 0 0 0 -0.1 -0.1 0.1 0
V 0.5 -0.8 -1 -0.6 -0.6 0.4 -0.3 -1 -0.1 0.1 0.9 0.2 -0.7 0.9 0.1 1.2 -0.3 1 0.9 0
M 0.3 0 -0.1 -0.1 0.8 -0.1 0 -0.1 -0.1 -0.2 -0.1 0 -0.1 -0.1 0 -0.2 -0.1 -0.1 0.3 0
W -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0
Y 0.2 0.4 -0.2 -0.1 0 -0.1 -0.1 -0.1 -0.1 0.6 -0.1 0 -0.1 -0.1 0 -0.4 -0.1 0 0 0
D -0.8 -0.1 -0.2 -0.1 0.1 -0.1 -0.1 1.3 0.1 -0.3 0.2 -0.1 0.6 0 0.3 -0.1 0.2 -0.2 -0.8 0
E -0.1 0.5 -0.2 0.4 0 0 0.1 -0.1 -0.3 0.1 -0.5 0.1 0.4 0 0.3 0.4 0.1 -0.6 0.1 -0.1
K 0.7 0.2 0.4 -0.1 -0.3 -0.2 -0.2 -0.3 0.4 0.3 0 -0.1 -0.2 0.1 -0.2 0 -0.1 -0.1 0.1 0
R -0.3 0 0.7 -0.1 0.5 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 0 -0.1 -0.3 0 0.1 0.3 -0.1 -0.4 0
H 0.7 0 0.6 -0.1 -0.3 0 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 -0.3 -0.2 -0.1 -0.4 -0.1 0.5 0.5 0
N 0 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0.3 -0.1 0 -0.1 0 0 -0.2 0
Q 0.3 -0.2 0.3 0.2 -0.4 -0.2 0.7 -0.3 -0.2 -0.3 -0.2 -0.1 -0.1 0.3 -0.1 -0.3 -0.3 -0.2 1.1 0
S 0.1 0.2 0.5 -0.1 0.6 -0.1 0.3 0.5 -0.5 0.5 -0.1 0 0.4 -0.5 -0.4 -0.3 0 -0.1 -0.4 -0.1
T 0.3 0.4 -0.8 -0.3 -0.4 0 0.1 1.1 0.2 -0.3 -0.5 0.3 -0.5 -0.6 0.1 0.2 0.7 0.3 0.7 -0.1
G -0.1 0 0.3 0 -0.2 0 0.1 -0.1 -0.1 -0.1 0.3 0 0.2 0.1 0 0 -0.1 -0.1 -0.3 0
P -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0
C -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0076 1.4 -0.9 0.1 -0.4 0.8 -0.1 -1 -0.4 0.2 1.1 0.3 -0.3 -0.1 -0.7 -0.1 1 1.1 -0.3 -1 -1
0077 1.2 -0.2 0.4 -0.3 1 -0.3 -0.6 -0.3 -0.1 0.1 0.1 -0.6 -0.3 -0.2 0.2 0 0.3 0.5 0.7 -1
Select residue pair below:
i_j Score Prob
0061_0077 1.417 1.00
0077_0199 0.871 0.83
0077_0216 0.743 0.67
0077_0201 0.645 0.51
0064_0077 0.629 0.49
Local Interactions:
i_j Score Prob
0076_0077 1.545 1.00
0077_0078 0.878 0.84
0077_0079 0.706 0.62
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.0177 seconds.