OPENSEQ.org -1515599153- GREMLIN Submission

May 4, 2021 - We are working on upgrading the webserver, some pages may not work.

GREMLIN_4ote

Return to Main Page

Instructions

Use the menu to the right to browse the coupling matrix.

Coupling matrix for [G:0072] and [Y:0073]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.2	-0.3	-0.1	-0.3	-0.1	-0.2	0	0.4	-0.1	0.1	-0.2	0	0	0.1	0.3	0.3	-0.4	-0.1	0	0
F	-0.1	-0.1	0	-0.2	0	-0.1	0	-0.2	-0.1	-0.1	-0.1	0	0	0	-0.1	0	-0.1	-0.1	0	0
I	-0.1	0	0	-0.1	0	0	0	-0.1	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0
L	0.1	-0.3	-0.1	0.3	-0.1	-0.1	0	-0.7	-0.1	0.3	0.2	0	0	0.7	-0.1	-0.2	-0.3	0.2	0	0
V	-0.1	-0.1	0	-0.3	-0.1	0	0	-0.2	0.3	-0.1	0.1	0	0	0.1	-0.1	-0.1	-0.1	0.3	0	0
M	-0.1	-0.1	0	-0.3	0	0	0	-0.2	-0.1	0.4	-0.1	0	0	0.1	0	0.1	-0.1	-0.1	0	0
W	-0.1	0	0	-0.2	0	0	0	-0.1	-0.1	0.4	0	0	0	0	0	-0.1	-0.1	-0.1	0	0
Y	-0.2	-0.2	-0.1	-0.3	0.2	-0.1	0	-0.3	0.3	0.2	0.2	0.2	0	-0.2	-0.1	0.1	0.3	0	0	0
D	0.7	0.5	-0.2	-0.2	-0.3	0.2	0.2	0.7	-0.1	-0.1	-0.5	-0.1	-0.2	-0.3	0.2	0.2	-0.4	0.7	0	0
E	-0.2	0	0.1	-0.2	0.5	0.1	-0.1	0.2	0.2	-0.3	-0.1	0	-0.1	-0.3	0.4	0.1	0.5	-0.4	0	0
K	-0.2	0	0.1	0.6	0	0.1	-0.2	0.3	0.3	-0.1	-0.4	0.2	-0.3	-0.1	0.3	0.3	0.7	-0.3	-0.1	-0.1
R	0	0	0.2	0.7	-0.3	-0.1	0.1	1	0.1	0	-0.4	-0.1	-0.1	-0.4	-0.3	-0.5	0.4	-0.4	0	0
H	0	0.1	0.1	0.7	-0.1	0.3	-0.1	0	-0.1	-0.4	0.3	-0.1	0	-0.3	-0.4	-0.2	0.6	-0.6	-0.1	-0.1
N	0.2	0.3	1	0.5	-0.2	0.3	0.4	0.2	0.1	-0.9	0.1	-0.3	0	0.2	-0.2	-0.2	0	0.6	-0.1	-0.1
Q	0.2	-0.1	-0.1	0.4	0.2	-0.1	-0.1	-0.2	0.2	0	0.2	0	-0.1	-0.2	0.5	-0.4	-0.5	0.1	0	0
S	-0.4	0.1	-0.3	-0.4	0.7	0.3	0.3	0.2	-0.2	0.7	-0.5	0	-0.1	0.5	-0.1	0.1	-0.1	-0.3	0	0
T	-0.3	0.1	-0.1	-0.2	-0.1	-0.1	0	-0.3	-0.1	-0.1	0.1	0	0	0.7	-0.2	0	-0.7	0.3	0	0
G	-0.2	1	0.3	0.2	0	-0.3	-0.1	1.4	0.1	0.3	0	-0.3	-0.2	-0.2	-0.5	0.2	1.3	-0.5	-0.1	-0.1
P	0.8	-0.3	-0.3	0.4	0.2	-0.2	-0.1	-0.5	-0.4	-0.1	0.4	0.5	0.4	-0.1	0.5	0.1	-0.6	-0.5	0	0
C	-0.1	0	0	-0.1	0	0	0	-0.1	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0072	-0.1	-0.9	-1.3	-0.2	-0.9	-1	-1.1	-0.7	1	0.1	1.9	-0.2	-0.1	1.8	0.1	0.5	-0.3	2.3	0.1	-1.3
0073	-0.1	0.5	0.5	0.9	0.3	-0.4	-0.1	0.8	0	0.1	0.2	-0.5	-0.5	0.4	-0.2	0	-0.7	0.6	-1.1	-1.1

Select residue pair below:

i_j	Score	Prob
0068_0073	1.983	1.00
0067_0073	1.963	1.00
0049_0073	1.144	0.97
0046_0073	0.755	0.69

Local Interactions:

i_j	Score	Prob
0072_0073	1.112	0.96
0073_0075	0.905	0.86
0073_0074	0.661	0.54

See all coupling residues
Download raw data

Page generated in 0.0129 seconds.