May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

GREMLIN_4ote Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [E:0066] and [S:0112]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 -0.3 -0.3 -0.2 -0.2 -0.2 -0.1 -0.1 -0.2 -0.1 -0.1 0.7 -0.1 -0.3 -0.1 0.6 -0.1 0.4 -0.2 1.1
F -0.1 0 -0.1 0 0.7 0 0 0 0 0 0 0 0 0 0 -0.5 -0.6 0 -0.1 0.4
I -0.3 0.6 -0.1 0.2 0 0.4 0 0 0 0 0 0 0 0.8 0 -0.6 -0.7 -0.1 -0.2 -0.1
L 0.1 -0.1 -0.2 0.6 0.1 -0.1 0 0 0 0 0 0 0 0.4 0 0.6 -0.8 -0.1 -0.1 -0.1
V -0.3 0.6 0.2 -0.1 -0.3 0 0 0 0 0 0 0 0 -0.1 0 0.5 -0.1 -0.1 -0.2 -0.1
M -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.4 0.5 0 -0.1 0
W -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 -0.2 -0.3 0 0 0
Y 0.3 0 0.4 0 -0.2 0 0 0 0 0 0 0 0 0 0 -0.5 -0.6 0 -0.1 0.4
D -0.1 -0.3 0.4 -0.2 0.6 -0.2 -0.1 -0.1 0.5 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 0.1 1.1 -0.2 -0.2 -0.3
E 0.1 -0.2 -0.1 -0.2 -0.1 -0.2 -0.1 -0.1 -0.1 0 0 -0.1 0 -0.1 0 0.9 1.1 -0.2 0.4 -0.2
K 0.1 -0.1 -0.3 -0.1 -0.6 -0.1 -0.1 0 -0.1 0 0 -0.1 0 -0.1 0 0.8 0.6 0.2 0.2 -0.1
R -0.2 -0.1 0.3 0 -0.5 0 0.4 0 0 0 0 0 0 0 0 0.3 0 -0.1 0.2 -0.1
H -0.3 0 -0.1 0 0.4 0 0 0 0 0 0 0 0 0 0 -0.3 0.1 0 -0.1 0
N 0.1 -0.4 1.2 -0.3 1.2 -0.3 -0.1 -0.1 -0.2 -0.1 -0.1 -0.2 -0.1 0.1 -0.1 0 1 -0.4 -0.3 -0.1
Q 0.8 -0.3 -0.3 0.2 0 -0.2 -0.2 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 0 0.2 0.3 0.8 -0.3
S 0.6 -0.1 -0.4 -0.2 0.1 0.9 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 0.4 0.3 0.3 -0.1 0
T 0.1 0.3 -0.3 0.3 -0.6 -0.1 0 -0.1 -0.1 0 0 -0.1 0 -0.1 0 0.8 0.6 -0.1 0 -0.2
G 0.5 0.3 -0.2 -0.1 0.8 -0.1 0 0.4 0 0 0 0 0 -0.1 0 -0.7 -0.4 -0.1 0.1 -0.1
P -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 -0.2 -0.3 0 0 0
C -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 -0.2 -0.3 0 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0066 1.4 -0.6 -0.1 0 -0.1 -0.9 -1.5 -0.8 1.2 1.3 0.4 0.2 -0.9 1.6 1.2 1.4 0.6 0.3 -1.5 -1.5
0112 2.4 -0.4 0.3 -0.4 2.4 -0.7 -0.8 -0.8 -0.6 -1.1 -1.1 -0.5 -1.1 -0.3 -1.1 2.3 2.6 -0.4 0.3 0
Select residue pair below:
i_j Score Prob
0066_0070 2.533 1.00
0066_0112 0.827 0.79
0066_0069 0.679 0.57
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...

Page generated in 0.0163 seconds.