May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0057] and [Y:0082]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.6 0.5 0.5 0.6 0 0 -0.1 0.3 -0.1 -1.2 -0.1 -0.1 -0.4 -0.3 -0.6 0.1 -0.2 0.2 0.5 -0.1
F 0.2 0.3 -0.7 0.2 -0.8 -0.5 -0.1 0.7 0.1 0.5 -0.1 -0.1 1.3 0.2 0.1 0.3 -0.2 -0.1 -0.9 -0.1
I -0.2 1.2 -0.1 -0.5 0 0.7 -0.1 -0.1 -0.1 -0.2 0 0 -0.4 -0.1 -0.1 -0.2 0.2 -0.1 0.8 0
L 0.4 -0.2 -0.3 0.2 0.1 0.1 -0.1 0.8 -0.2 0.4 -0.1 -0.1 -0.8 -0.2 0.6 -0.3 0.3 -0.1 0.7 -0.1
V -0.1 1.1 0.1 -0.3 -0.3 -0.1 -0.1 -0.6 0 -0.3 0 0 -0.2 -0.1 -0.2 -0.1 -0.1 0 1.7 0
M -0.2 0.4 -0.2 -0.1 -0.1 0 0 0.7 0 -0.1 0 0 -0.2 0 -0.1 -0.1 0 0 0.3 0
W 0.1 -0.1 -0.2 -0.1 -0.3 0 0 -0.5 0 0.1 0 0 -0.1 0 -0.1 1.1 -0.1 0 -0.1 0
Y -0.2 -0.1 0.6 0.2 0.5 -0.6 -0.1 -0.4 0.2 -0.7 -0.1 -0.1 1.6 0.1 -0.2 -0.2 0.7 -0.1 -1.1 -0.1
D -0.1 0.2 -0.1 0 -0.1 0 0 -0.2 0 -0.1 0 0 -0.1 0 0 0 0 0 -0.1 0
E 1.6 -0.3 -0.1 -0.1 0.1 0 0 -0.3 0 -0.2 0 0 -0.1 0 -0.1 -0.1 0 0 -0.2 0
K -0.6 -0.5 -0.2 -0.1 -0.3 -0.1 0 -0.3 0 2.2 0 0 -0.1 0 0.3 -0.1 -0.1 0 -0.1 0
R -0.1 -0.4 -0.1 0 0.3 0 0 -0.1 0 -0.1 0 0 0 0.4 0 0 0 0 -0.1 0
H -0.1 0.9 -0.1 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 -0.1 0
N -0.3 -0.6 0.7 0 0.5 -0.1 0 -0.3 0 1 0 0 -0.1 0 0.2 -0.1 -0.2 0 -0.5 0
Q 1.4 -0.8 -0.3 -0.2 -0.1 0.3 0 -0.2 0 0.5 0 0 0 -0.1 0.5 -0.1 -0.1 0 -0.1 0
S -0.9 -0.1 0.9 0.4 0.8 0.1 0.5 0.3 -0.1 -0.8 -0.1 -0.1 -0.3 -0.1 -0.3 -0.3 -0.1 -0.1 -0.4 -0.1
T -0.1 -0.1 0.5 0 0.2 0 0 -0.1 0 -0.1 0 0 -0.1 0 0 0 0 0 -0.1 0
G -0.2 -0.3 -0.2 -0.1 0.2 0 0 0.6 0 -0.2 0 0 -0.1 0 -0.1 -0.1 -0.1 0 -0.2 0
P 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0
C 0.3 -0.2 -0.2 0.1 -0.3 0 0 0.4 0 -0.1 0 0 -0.1 0 0 0 0 0 0.1 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0057 0 1.3 1 1.9 0.4 0.1 0.1 0.8 -0.6 -0.3 -0.3 -0.6 -0.6 0 -0.6 -0.1 -0.6 -0.2 -0.9 -0.1
0082 0.5 1.3 1.1 0.5 0.9 -0.2 -0.8 1.6 -0.9 0.6 -1.2 -1.2 -0.7 -0.7 -0.3 -0.3 -0.2 -0.9 0.1 -1.2
Select residue pair below:
i_j Score Prob
0057_0081 1.121 0.97
0057_0082 0.864 0.83
0057_0219 0.816 0.77
0057_0084 0.728 0.65
0019_0057 0.691 0.59
0015_0057 0.609 0.45
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.0122 seconds.