May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [G:0051] and [E:0205]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 -0.2 0 0
F 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 0 0
I 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 0 0
L 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 0 0
V -0.1 0 0 0 0 0 0 0 -0.1 0.2 -0.1 0 0 0 0 0 0 -0.1 0 0
M 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 0 0
W 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 0 0
Y 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 0 0
D 0.2 0 0 0 -0.1 0 0 0 -0.3 0.4 0.6 -0.1 0 -0.1 -0.1 0.1 -0.2 0.2 0 0
E -0.2 0 0 0 -0.1 0 0 0 0.2 0.1 0.6 0 0 -0.1 -0.1 -0.2 0.3 0 0 0
K -0.1 0 -0.1 -0.1 -0.1 0 0 0 1.1 0.6 -1.1 -0.2 -0.1 -0.1 -0.7 0.3 0.1 1.3 -0.1 0
R 0.3 0 0 0 -0.1 0 0 0 0.1 0.1 0 0 0 -0.1 -0.1 -0.1 0 0.1 0 0
H 0.3 0 0 0 0.2 0 0 0 0.6 -0.5 0.1 -0.1 -0.1 0.1 0.1 0.1 0.1 -0.1 0 0
N 0 0 0.2 0 0.3 0 0 0 0.1 0.1 -0.3 -0.1 0 -0.1 0.2 0.1 -0.2 0.3 0 0
Q -0.1 0 0 0 0 0 0 0 0.3 -0.2 -0.1 0 0 0 0 -0.1 0 0.2 0 0
S 0.2 0 0 0 0 0 0 0 -0.1 -0.2 -0.1 0 0 0.1 0 -0.1 0 0 0 0
T 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 0 0
G 0.2 -0.3 -0.4 -0.3 0.1 -0.3 -0.3 -0.3 0 0.2 1.1 0.5 -0.1 0.6 0.8 0.3 0.1 0 -0.1 -0.3
P -0.1 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 -0.1 0.3 0
C 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0051 -0.7 -0.8 -0.8 -0.8 -0.6 -0.8 -0.8 -0.8 0.9 0.6 1.8 0.3 1 1.1 -0.3 -0.5 -0.8 3.6 -0.5 -0.8
0205 1.1 -0.8 -0.7 -0.8 0.1 -0.8 -0.8 -0.8 1.7 1.1 0.8 -0.1 -0.6 0.3 -0.3 0.8 0 1.3 -0.3 -0.8
Select residue pair below:
i_j Score Prob
0051_0205 1.119 0.96
0202_0205 1.070 0.95
0205_0209 0.881 0.84
Local Interactions:
i_j Score Prob
0205_0207 2.389 1.00
0203_0205 1.969 1.00
0205_0206 1.763 1.00
0204_0205 1.103 0.96
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.0134 seconds.