May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

GREMLIN_4ote Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [K:0023] and [L:0033]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.9 -0.3 0.5 0.2 0.7 -0.5 0 0 0 0 0 0 0 0 0 -0.1 0.2 -0.2 -0.1 -0.1
F 0 0.2 -0.1 -0.3 -0.5 0 0 0 0 0 0 0 0 0 0 0 0.6 0 0 0
I 0.5 0.6 -0.4 -0.4 -0.3 -0.2 0 0 0 0 0 0 0 0 0 0 -0.2 0.3 0.4 0.4
L -0.1 -0.1 -0.1 -0.9 0.4 -0.1 0 0 0 0 0 0 0 0 0 0 0.3 0.4 0 0
V -0.1 -0.1 0.1 -0.2 1.1 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0
M 0 0 0.3 -0.2 -0.5 0 0 0 0 0 0 0 0 0 0 0 0.3 0 0 0
W 0 0 -0.1 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 -0.1 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D -0.1 -0.1 0.5 0.3 -0.6 -0.1 0 0 0 0 0 0 0 0 0 0.3 0 -0.1 0 0
E -0.1 -0.1 0.1 0.5 0.3 0.2 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0
K -0.5 0.2 0.5 0.7 0.3 0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 0.1 -0.2 -0.1
R -0.1 -0.1 0.3 0.2 0.1 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
H 0 0 -0.1 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N -0.1 -0.1 -0.2 0.6 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q -0.2 0.1 0.1 0.6 -0.2 0.5 0 0 0 0 0 0 0 0 0 0 -0.2 -0.1 -0.1 0
S -0.1 -0.1 0.7 0.3 -0.5 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
T -0.1 -0.1 -0.4 -0.1 1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G -0.1 -0.1 0.1 0.3 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
P 0 0 -0.2 -0.3 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 -0.1 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0023 1.3 -0.5 0.9 -0.5 0.2 -0.5 -1.1 -1.1 -0.1 0.6 1 0.1 -1.1 0.2 0.7 0.3 0.2 0 -0.9 -1.1
0033 0.2 0.4 2.1 1.1 2.5 0.1 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.3 0.1 -0.1 -0.2 -0.4
Select residue pair below:
i_j Score Prob
0019_0033 0.642 0.51
0010_0033 0.567 0.38
0033_0215 0.517 0.30
0023_0033 0.509 0.29
Local Interactions:
i_j Score Prob
0031_0033 0.789 0.74
0033_0035 0.534 0.33
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...

Page generated in 0.0149 seconds.