May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [E:0021] and [K:0223]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.5 0.4 -0.2 0.2 -0.2 -0.1 -0.1 -0.2 -0.4 0.1 -0.8 0.5 0.4 0.3 -0.7 0.2 0.3 0.1 0.3 -0.1
F 0.1 0 -0.2 -0.2 -0.5 -0.1 -0.1 -0.1 0.7 0.6 0 0.5 -0.1 -0.4 0.1 0 -0.6 -0.1 0.2 -0.1
I 0.5 -0.1 -0.1 -0.1 0.2 0 0 0 0 0.4 -0.2 0 -0.1 0.3 -0.2 -0.2 -0.1 -0.1 -0.4 0
L -0.5 -0.1 0.2 0 0.2 0 0 0 -0.2 0.1 0.4 0 -0.1 0.5 -0.2 -0.4 0 -0.1 0.1 0
V 0.5 -0.2 -0.2 0.6 0.4 -0.1 -0.1 -0.1 -0.5 0.1 0.6 -0.3 -0.1 0.3 0.1 -1 -0.1 -0.2 0.5 -0.1
M -0.2 0 0 0 0 0 0 0 -0.2 -0.2 0.1 -0.1 0 0 0.4 -0.1 0 0 0 0
W 0.1 0 0 0 -0.1 0 0 0 0.1 0.2 0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 0 -0.1 0
Y -0.3 0.2 -0.1 -0.1 0.1 -0.1 0 -0.2 0.5 0.2 -0.3 1.3 -0.1 -0.6 0.7 -0.6 -0.3 0.2 -0.1 0
D 0.1 0 -0.1 0 -0.1 0 0 0 -0.1 -0.5 0 0.3 0 -0.1 0.5 0.1 0.2 -0.1 -0.1 0
E -0.1 -0.1 0.3 -0.1 0 -0.1 0 -0.1 0.4 -0.3 0.8 0 -0.1 0.1 0.2 0.2 -0.3 -0.1 0 0
K 0 0 0 0 -0.1 0 0 0 0.3 0.9 -0.3 -0.4 -0.1 0.1 -0.3 0 0.3 -0.1 -0.2 0
R -0.1 0 0 0 0 0 0 0 -0.2 -0.3 -0.2 0.3 0 0.4 -0.1 -0.1 -0.1 0 0 0
H -0.3 -0.1 -0.1 -0.1 -0.1 0 0 0.3 1.6 -0.2 -0.4 -0.2 -0.1 -0.3 -0.2 1.4 -0.2 -0.2 -0.5 0
N -0.1 0 0 0 -0.1 0 0 0 0.1 0.2 0 -0.1 0 -0.1 -0.2 0.3 0.2 -0.1 -0.1 0
Q 0.1 -0.1 -0.1 -0.1 0 0 0 -0.1 -0.4 -0.5 0.2 -0.6 -0.1 0.3 0.5 0.4 0.1 0.1 0.7 0
S -0.2 -0.1 -0.1 0 -0.1 0 0 0 -0.1 0.1 1.1 -0.3 -0.1 -0.3 0.1 0.2 0.5 -0.1 -0.3 0
T 0.4 -0.1 0 -0.1 0.1 0 0 -0.1 -0.3 0.2 -0.2 0.2 -0.1 0.1 0.2 0.4 -0.6 -0.3 0.5 0
G -0.1 -0.2 -0.1 -0.1 0.1 0 0 0.4 0 0.2 -0.7 -0.2 -0.1 0.1 -0.3 -0.1 0.2 0.6 -0.2 0
P 0.8 0.3 0.2 0 0.2 0.2 0 0 -0.4 -0.5 -0.4 -0.1 0 -0.2 -0.4 0.1 0.3 -0.1 0.1 0
C -0.1 0 0 0 0 0 0 0 -0.1 -0.1 0.1 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0021 1.1 -0.5 -0.1 -0.1 0.4 -0.9 -0.6 0.6 0.1 1 0 -0.8 0.1 -0.2 0.5 0.4 0.7 -0.7 -0.1 -1
0223 1.4 -0.7 -0.8 -0.9 -0.4 -1 -1.1 -0.8 1.1 1.7 1 0.7 -0.7 0.2 0.6 0.6 0.4 -0.4 0.1 -1.1
Select residue pair below:
i_j Score Prob
0025_0223 2.235 1.00
0021_0223 0.979 0.91
0024_0223 0.681 0.57
0223_0226 0.518 0.31
Local Interactions:
i_j Score Prob
0222_0223 1.590 1.00
0221_0223 1.156 0.97
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.0212 seconds.