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Coupling matrix for [E:0020] and [V:0035]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 -0.1 0.1 0.3 0.2 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.1 0.7 -0.3 0.2 -0.1 0
F 0 0 -0.3 0.2 -0.3 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
I 0 -0.1 -0.3 -0.4 -0.1 0 0 -0.2 0 0 0 0 0 0.5 0 0 -0.2 0.4 0.3 0
L -0.1 -0.3 -0.8 -0.6 -1.1 -0.1 -0.1 0 0.6 0.7 -0.1 0 0 0.8 0.4 0.2 0.3 -0.1 -0.1 0
V 0 -0.1 0.6 0.2 -0.5 0 0 -0.2 0 0 0 0 0 -0.1 0 0 0.2 -0.1 -0.1 0
M 0 -0.1 -0.3 -0.3 -0.3 0 0 -0.1 0 0 0 0 0 0.4 0 0.5 -0.1 0 0 0
W 0 -0.1 -0.2 -0.2 -0.2 0 0 0 0 0 0.5 0 0 0 0 0 -0.1 0 0 0
Y -0.1 1 -0.2 -0.4 0.1 0 0 -0.1 0 0 0 0 0 0 0 0 -0.2 0 -0.1 0
D -0.1 0.1 -0.1 -0.1 0.1 0 0.5 0.4 0.2 -0.2 0.6 0.2 -0.1 -0.4 0.2 -0.3 0.2 0.3 -0.2 -0.1
E 0.5 0 1.2 0.9 0.5 0.2 -0.3 -0.2 -0.4 0.2 -0.3 -0.2 -0.1 -0.6 -0.3 0.3 -0.5 0.1 0.4 -0.1
K 0.1 0.6 0.8 0.8 0.1 -0.3 -0.1 0.7 -0.1 -0.2 -0.3 0.2 -0.1 -0.5 -0.2 -0.3 0.4 -0.2 -0.2 -0.1
R -0.1 0 0.7 0.1 0.4 0.2 -0.1 0.1 -0.1 -0.1 -0.1 0.1 0 -0.2 -0.1 -0.2 0 -0.1 -0.2 0
H 0 -0.1 0.1 -0.3 0.4 0 0 -0.1 0 0 0 0 0 0 0 0 -0.2 0 0 0
N 0.1 0.7 -0.1 0 0.9 -0.2 -0.1 0.7 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 -0.2 -0.2 -0.2 -0.1 0
Q -0.1 0 0.7 0.8 0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 -0.1 0 -0.3 -0.1 -0.2 0.4 -0.2 0 0
S -0.1 0.1 0.5 0.1 0.5 0 0 -0.3 0 0 -0.1 0 0 -0.1 0 -0.1 -0.2 -0.1 0 0
T 0.2 -0.5 -0.4 -0.2 0.4 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 0 0.7 -0.1 -0.1 0.8 -0.1 0.4 0
G -0.1 -0.2 -0.4 -0.2 0.1 0.7 0 -0.1 0 0 0 0 0 -0.1 0 -0.1 0.5 0 0 0
P -0.1 0.1 -0.7 0.7 -0.3 0 0 -0.2 0 0 0.4 0 0 -0.1 0 0 0.1 -0.1 0.3 0
C 0 0 -0.2 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0020 0.6 -1.2 -0.7 -0.3 -0.5 -1 -1.1 -0.7 1.8 1.8 1.4 0.1 -0.9 0.7 1.2 0.1 0.5 -0.4 -0.4 -1.3
0035 0 1.2 2.1 1.7 1.8 -0.5 -0.9 0.6 -0.8 -0.7 -0.4 -0.7 -1.1 -0.5 -0.8 -0.3 0.9 -0.4 0.3 -1.1
Select residue pair below:
i_j Score Prob
0020_0023 1.714 1.00
0020_0035 0.979 0.91
0017_0020 0.801 0.76
0016_0020 0.764 0.71
0020_0139 0.602 0.44
0020_0037 0.539 0.34
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
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