May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [E:0017] and [K:0231]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.6 -0.2 0 0 -0.2 -0.1 0 0 0.1 -0.2 -0.3 0 0.2 0.2 -0.1 -0.1 -0.1 0.2 -0.1 0
F -0.1 0 -0.1 -0.1 -0.1 0 0 0 -0.1 0.8 -0.1 0 -0.1 -0.1 -0.1 0 -0.2 0 0 0
I -0.1 0 -0.1 -0.3 -0.2 0 0 0.2 0.5 -0.4 0.8 0.4 0.1 -0.4 0 -0.1 -0.6 0.4 0 0
L -0.1 0 -0.1 -0.2 -0.1 0 0 -0.1 0.3 0.7 0 -0.1 -0.2 -0.3 0.4 -0.1 -0.1 0 0 0
V -0.2 -0.1 -0.3 -0.3 -0.1 0.5 0 0.2 0.5 0.6 0.6 -0.5 0 -0.1 -0.2 -0.2 -0.8 -0.1 0 0
M -0.1 0 -0.1 -0.1 -0.1 0 0 0 -0.1 -0.3 -0.2 -0.1 -0.1 0.3 -0.1 0 0.6 0 0 0
W 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 -0.1 0 0 0
Y 0 0 0 0 -0.1 0 0 0 -0.1 -0.1 -0.1 0 0 -0.1 -0.1 0 -0.1 0.4 0 0
D 0.7 0.4 0.2 0.1 0.2 0.5 -0.2 -0.9 -0.3 0 0.8 0.3 -0.1 0.3 -0.2 0.5 -0.1 -0.1 -0.1 -0.2
E -0.1 -0.4 -0.1 0.3 0.1 -0.5 -0.2 -0.1 -0.3 -0.4 1.1 1.4 0.4 0.2 -0.1 0.1 -0.1 -0.4 -0.2 -0.2
K 0 0.3 -0.2 -0.1 -0.1 -0.1 -0.1 0.6 1 0.2 -1 -0.5 -0.1 -0.1 0.6 -0.2 0.5 -0.3 -0.1 -0.1
R -0.4 -0.2 0.6 0.6 0.3 -0.1 0 0.3 -0.2 0.2 -0.6 0 -0.4 -0.5 -0.1 0.4 0.5 -0.1 0 0
H -0.1 0 0 0 0.4 0 0 0 0.1 -0.2 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 0 0
N -0.1 -0.1 0.3 -0.2 -0.2 0 0 0.4 -0.2 0.5 0.1 -0.1 -0.2 0.1 -0.2 0 -0.1 -0.1 0 0
Q -0.2 -0.2 0.2 0.8 -0.2 -0.2 -0.1 -0.1 -0.2 -0.1 0.1 -0.7 -0.2 0.2 0.7 0 0.8 -0.2 -0.1 -0.1
S 0 -0.1 -0.3 0.3 -0.1 -0.1 0 -0.1 0.3 0.8 -0.3 -0.2 0.2 0.2 -0.1 0.1 0 0.2 0 0
T -0.2 -0.1 0.6 -0.1 0 -0.1 0 0.1 0.4 -0.3 -0.4 -0.3 0.5 0.4 -0.3 -0.2 0.1 -0.1 0 0
G -0.2 0 -0.1 -0.2 0.7 0 0 -0.2 0.2 -0.1 -0.2 -0.1 -0.1 -0.1 -0.2 -0.1 0.4 0 0 0
P 0.4 0.3 -0.2 -0.1 0.3 -0.1 -0.1 -0.2 -1.1 -0.1 -0.4 0.1 0.3 0.5 0.1 0.2 0.2 0.1 0.2 -0.1
C 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 -0.1 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0017 0.7 -0.7 -0.1 -0.3 0 -0.7 -1.1 -0.8 2.2 1.4 0.9 -0.1 -0.8 0 0.4 0.3 0.2 -0.5 1.3 -1.1
0231 0.3 -0.8 0.3 0.5 0.7 -0.9 -1.5 0.1 0.7 1.6 0.1 -0.3 0.3 0.6 0.7 0.3 0.7 -0.6 -1.2 -1.5
Select residue pair below:
i_j Score Prob
0017_0231 1.413 1.00
0227_0231 1.347 0.99
Local Interactions:
i_j Score Prob
0230_0231 0.845 0.81
0231_0232 0.606 0.45
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.1274 seconds.