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Coupling matrix for [T:0011] and [L:0227]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.7 -0.2 -0.1 -0.1 0.7 0.3 -0.1 -0.4 -0.1 -0.1 0.5 -0.1 -0.3 -0.1 0.4 -0.1 -0.3 0.1 0 0
F -0.1 -0.2 0 0 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
I 0.3 -0.8 0.7 -0.1 0.4 -0.1 -0.5 -1 -0.2 0.8 0.5 -0.2 -0.3 0.1 0.4 -0.2 0.5 -0.1 0 0
L -0.3 1.1 -0.1 -0.1 -0.2 0 0.4 0.1 0 -0.1 -0.2 0 -0.1 0 -0.1 -0.1 -0.1 -0.1 0 0
V 0.2 -1.6 0.4 0.7 1.1 -0.2 -0.6 -0.6 0.8 0 0 -0.4 -0.1 0.4 0 -0.4 0.4 1.4 -0.1 -0.1
M 0.5 -0.6 -0.1 1.1 -0.3 0 -0.6 -0.6 -0.2 0.9 0 0.2 0 0.6 -0.3 0.4 -0.1 0 -0.1 -0.1
W -0.2 0.6 -0.1 -0.1 -0.1 0 -0.1 -0.2 0 -0.1 -0.1 0 0 0 0 0 0 -0.1 0 0
Y -0.3 -0.5 0.3 -0.1 -0.2 0 -0.1 0 0 -0.1 0.2 0 0.4 0 -0.1 0 0.4 -0.1 0 0
D 0.9 0.6 -0.2 -0.2 -0.2 0 -0.4 -0.3 0 -0.1 -0.2 0 -0.1 0 -0.1 0 -0.1 -0.1 0 0
E -0.2 -0.3 -0.1 -0.2 0 0 1.3 0.2 0 -0.1 -0.2 0 -0.1 0 -0.1 -0.1 -0.1 -0.1 0 0
K -0.1 -0.2 0 0 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
R -0.1 1 -0.1 -0.2 -0.2 0 -0.1 0.1 0 -0.1 -0.2 0 0.2 0 -0.1 0 -0.1 -0.1 0 0
H -0.4 0.6 -0.2 0.4 -0.2 0 -0.2 0.3 0 -0.1 -0.2 0 -0.1 0 -0.1 0 -0.1 0 0 0
N 0.1 -0.5 0.1 -0.6 -0.3 -0.1 -0.5 0.7 -0.1 0.8 0.5 -0.1 0.8 -0.2 0 -0.2 -0.3 -0.3 0 0
Q -0.5 0.3 -0.1 -0.2 -0.2 0 -0.2 0.9 0 -0.1 0.5 0 -0.1 0 -0.1 0 -0.1 -0.1 0 0
S 0.2 0.9 0.1 -0.4 -0.3 -0.1 1.1 0.9 -0.2 -0.3 -0.8 -0.2 0.1 -0.2 0 0.4 -0.3 -0.4 -0.1 -0.1
T 0.3 0.6 0.4 0.4 0.5 0.1 -0.4 0 -0.4 -0.2 -0.5 0.5 -0.4 -0.5 0.4 0.4 0.4 -0.2 -0.2 -0.2
G -0.2 -0.2 -0.2 -0.2 -0.4 -0.1 0.8 0.7 0 -0.1 -0.1 0 -0.1 0 0 0 -0.1 -0.1 0 0
P -0.4 0.8 -0.1 -0.1 -0.1 0 -0.1 -0.2 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0
C 0.8 -0.8 -0.4 0.2 0.6 0 -0.1 -0.3 -0.1 -0.2 0.3 0.4 -0.1 0 -0.1 -0.1 -0.1 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0011 0.7 -1.4 0.8 -0.2 1.6 0.8 -1 -0.7 -0.5 -0.4 -1.4 -0.6 -0.4 0.7 -0.4 1.1 2.1 -0.5 -1.1 -0.6
0227 1.6 1.2 0.7 0.7 1.1 -1.1 0.2 1.3 -0.8 0.2 0.4 -0.7 -0.4 -0.8 -0.1 -0.4 0 -0.3 -1.4 -1.4
Select residue pair below:
i_j Score Prob
0011_0015 0.498 0.28
0011_0227 0.492 0.27
Local Interactions:
i_j Score Prob
0010_0011 0.711 0.62
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
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