OPENSEQ.org -1515599153- GREMLIN Submission

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Coupling matrix for [V:0008] and [L:0019]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	-0.1	0.6	-0.1	-0.2	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0
F	-0.2	-0.5	0.8	-0.1	1.4	-0.3	-0.7	-0.1	0	0.4	0	0	0	0	0	0	0.3	0	0	0
I	0.2	-0.1	0.2	0.6	0.7	-0.1	1	0.3	-0.1	-0.4	0.1	0.3	-0.1	-0.3	0.5	-0.2	0.3	-0.3	-0.3	-0.3
L	0.8	0.7	-0.1	0.2	-0.6	-0.8	1.2	0.2	0	-0.1	-0.1	-0.1	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0.4
V	0	0.5	-0.5	1.4	0.4	1	1	-0.2	-0.1	0	-0.2	-0.3	-0.1	0.3	-0.5	0.1	-0.1	0.1	0.1	-0.2
M	0.1	0.1	-0.2	0.1	-0.2	0.7	-0.3	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
W	0	0	0	-0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0
Y	-0.1	0.8	-0.1	-0.2	-0.1	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0
D	0	0	0	-0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0
E	0	0	0	-0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0
K	-0.1	-0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
R	-0.1	-0.1	-0.1	0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0
H	0	0	0	-0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0
N	0	0	0	-0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0
Q	0.4	-0.1	-0.1	-0.1	-0.1	0	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0
S	0	0	0	-0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0
T	-0.1	-0.1	-0.1	0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0
G	-0.1	-0.1	0.3	-0.3	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0
P	0	0	0	-0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0
C	0	-0.1	-0.1	0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0008	-0.3	1.1	3.4	2	3.2	0	-0.9	-0.2	-0.9	-0.9	-0.7	-0.7	-0.9	-0.9	-0.7	-0.9	-0.8	-0.5	-0.9	-0.7
0019	0.7	0.9	0.7	0.7	0.7	0.2	0.5	0.2	-0.7	-0.3	-0.5	-0.4	-0.7	-0.4	-0.5	-0.5	0.2	-0.6	-0.6	-0.5

Select residue pair below:

i_j	Score	Prob
0008_0019	0.853	0.81
0008_0055	0.614	0.46

Local Interactions:

i_j

Score

Prob

See all coupling residues
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