May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
GREMLIN_4ote Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [I:0006] and [I:0212]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 -0.1 0.3 -0.1 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
F 0.7 0.1 -0.4 -0.3 0.8 -0.1 -0.1 -0.2 0 0 0 0 0 0 0 -0.1 -0.2 0.2 0 0
I -0.2 0.2 0.6 0.7 0.4 -0.2 0.3 0.6 -0.2 0 -0.3 -0.1 -0.2 -0.2 -0.3 0.2 0.4 -0.1 -0.2 -0.2
L 0.3 -0.1 1.1 0.6 0.9 0.5 -0.6 -0.6 -0.1 -0.2 -0.2 -0.2 0.1 -0.1 0.2 -0.4 0.2 -0.2 -0.1 -0.1
V 0 0 0.2 0.4 -0.1 -0.1 0.2 1.2 -0.1 -0.1 0.3 -0.2 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 -0.1
M -0.1 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W -0.1 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.2 0.8 -0.2 0.1 -0.1 0 0 -0.4 0 0 0 0 0 0 0 0 0 0 0 0
D -0.1 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 -0.1 -0.1 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0.4 0 0
K 0.7 -0.1 -0.3 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 -0.2 0.3 0 0
R 0.1 -0.1 0.2 -0.1 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
H -0.1 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N -0.1 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q -0.1 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S -0.1 0 0.2 -0.1 -0.2 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
T -0.1 0 -0.2 -0.1 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0.4 0 0 0
G -0.1 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P -0.1 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.1 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0006 -0.5 0.7 2.6 1.9 1.8 -0.7 -0.7 -0.2 -0.7 -0.2 0.2 -0.3 -0.7 -0.7 -0.7 -0.6 -0.4 -0.7 -0.7 -0.7
0212 1.1 0.9 2.2 1.5 1.4 -0.3 -0.3 0.5 -0.9 -0.8 -0.6 -0.6 -0.7 -0.9 -0.6 -0.4 0.2 0.2 -0.9 -0.9
Select residue pair below:
i_j Score Prob
0006_0211 1.185 0.98
0006_0031 0.964 0.90
0006_0215 0.719 0.64
0006_0212 0.538 0.34
0006_0019 0.511 0.30
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: K D D K K ...
Page generated in 0.0129 seconds.