OPENSEQ.org -1515599153- GREMLIN Submission

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Coupling matrix for [K:0004] and [K:0211]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.3	0.4	-0.4	-0.1	-0.9	-0.1	-0.3	0.8	0.1	-0.1	-0.3	0.8	0.4	0.5	-0.6	0.5	-0.4	-0.2	-0.1	0
F	-0.1	0	0	0	-0.1	0	-0.1	0	0.3	-0.1	-0.1	-0.1	0	-0.1	0	0	-0.1	0	0	0
I	-0.1	-0.2	0.2	-0.3	-0.5	0	0.4	-0.1	-0.4	0.4	-0.2	-0.7	0.4	0	-0.2	0.3	-0.1	0.9	0.1	0
L	1.1	0	0	-0.1	-0.1	0	-0.3	0	-0.1	-0.1	-0.2	0	0	-0.1	0	0	-0.1	-0.1	0	0
V	0.8	0.3	-0.4	-0.8	0.1	-0.1	0.3	-0.3	-0.5	0.7	-0.8	0	-0.1	0.5	-0.5	0.4	0	0.1	0.4	0
M	-0.1	-0.1	0	0	0	0	0.1	0	-0.1	-0.1	0.1	-0.1	0	-0.1	0	0	-0.1	0	0	0
W	-0.1	0	0	0	0	0	-0.1	0	0	0	-0.1	-0.1	0	0	0	0	-0.1	0	0	0
Y	-0.2	0	0	0	-0.1	0	0.1	0	-0.1	-0.1	-0.1	-0.1	0	0.1	0.4	0	-0.1	0	0	0
D	-0.3	-0.2	-0.2	0.3	0.7	0.4	-0.2	-0.1	0.1	-0.7	0.5	0.6	-0.1	-0.5	0.5	-0.1	0.4	-0.5	-0.2	0
E	0.2	0.4	0.1	0.4	0.3	0.5	0.2	-0.4	-1	-0.7	1	0.1	-0.3	-0.3	-0.2	0	0.2	0.2	-0.3	0
K	-0.2	-0.2	0.5	0.6	0.3	-0.4	0	0.2	0.2	0.9	0	0.1	-0.3	-0.4	-0.1	-0.2	0.7	-0.5	-0.4	-0.1
R	-0.1	-0.3	0.7	-0.3	0.4	-0.1	-0.1	0.1	1.2	0.4	-0.1	-0.6	-0.1	-0.5	-0.2	-0.2	-0.4	0.1	0.3	0
H	-0.3	0.2	0.2	-0.2	-0.4	0	-0.5	0.3	0.4	0	0.9	-0.4	0	0.1	-0.1	-0.1	0.2	-0.2	-0.1	0
N	0.2	-0.3	-0.2	0.5	0.2	-0.1	-0.4	-0.3	-0.3	-0.6	1.5	-0.2	-0.2	0.9	0.8	-0.2	-0.2	-0.5	-0.2	0
Q	0.2	0.6	-0.3	1	-0.3	-0.1	0.4	-0.1	-0.7	0	-0.2	0.4	-0.2	-0.6	0	0.2	0.1	0.6	-0.2	0
S	-0.4	-0.4	0.5	0.1	-0.2	-0.1	-0.1	-0.2	-0.1	0.4	-0.2	0.5	0.3	0.6	0	-0.3	-0.5	-0.3	0.6	0
T	1.1	0.4	-0.2	-0.7	0.8	-0.2	0.5	-0.1	-0.1	0	-0.1	-0.9	0.1	0.2	-0.5	0.1	-0.1	0.1	0.1	-0.1
G	-1	-0.3	0	0.2	0.2	0	-0.3	-0.2	1.6	-0.5	-0.7	0.6	-0.1	-0.4	0.4	-0.3	0.3	0.5	-0.1	0
P	-0.4	-0.2	-0.1	-0.2	-0.2	0	0.4	0.3	-0.2	0.5	0	0.1	0	0.1	0.3	-0.1	-0.1	-0.1	0	0
C	-0.1	0	0	0	0	0	-0.1	0	0	0	-0.1	-0.1	0	0	0	0	-0.1	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0004	0.5	-1.1	-0.3	-0.7	0.1	-1.1	-1.3	-0.9	0.3	1.1	1.3	0.7	-0.1	0.8	0.9	0	0.6	0.6	-0.2	-1.3
0211	0.8	-0.1	0.5	0.6	0.2	-0.6	0.1	-0.3	0.4	0.5	0.9	-0.3	-0.6	0.2	0.2	0.1	-0.8	-0.1	-0.7	-0.9

Select residue pair below:

i_j	Score	Prob
0004_0211	1.444	1.00
0004_0031	0.851	0.81
0004_0032	0.552	0.36
0004_0214	0.522	0.31

Local Interactions:

i_j	Score	Prob
0002_0004	1.749	1.00
0003_0004	1.725	1.00
0004_0005	0.966	0.91

See all coupling residues
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