OPENSEQ.org -1515599153- GREMLIN Submission

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Coupling matrix for [K:0004] and [K:0005]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	-0.1	-0.4	0.6	-0.3	-0.1	0	-0.1	0.3	0.4	-0.2	-0.4	-0.6	-0.3	-0.3	0.1	-0.2	0.2	1.3	0
F	0.4	0	0	0.1	-0.2	0	0	0	0	-0.1	-0.1	0	0	0	0	-0.1	-0.3	0	-0.1	0
I	-0.2	0	0.1	-0.1	0	0	0	0	0.2	-0.2	-0.2	-0.1	0	0.6	-0.1	-0.2	0.2	-0.1	-0.1	0
L	0.1	0	-0.1	0	-0.4	0	0	0	0	-0.2	0.5	0.3	-0.1	0	0	0.2	-0.4	0	-0.2	0
V	-0.5	-0.1	-0.2	0	-0.1	-0.1	0	-0.1	-0.1	-0.3	0	0.3	0.3	0.3	0.4	0.1	0.7	-0.2	-0.3	0
M	-0.1	0	0	0	0.1	0	0	0	0	-0.1	0.1	0	0	0	0	-0.1	-0.3	0	-0.1	0
W	0	0	0	0	-0.1	0	0	0	0	-0.1	-0.1	0	0	0	0	0	-0.2	0	-0.1	0
Y	0	0	0	0	-0.1	0	0	0	0	-0.1	-0.1	0	0	0	0	0	0.3	0	-0.1	0
D	0.5	0	-0.3	0.3	0	-0.1	0	-0.1	-0.4	0.1	0.4	0.4	-0.4	-0.3	0.6	-0.1	0.3	-0.1	-0.5	0
E	0.1	-0.1	0.1	-0.4	0.5	-0.1	-0.1	-0.1	0.3	0.3	0.6	-0.3	-0.5	-0.2	0	-0.1	0.6	-0.2	0.3	-0.1
K	-0.2	-0.1	0.4	-0.1	-0.1	-0.1	-0.1	-0.1	0.3	0.7	0	0.1	0	0.8	-0.3	0	0.3	-0.3	0.3	-0.1
R	-0.2	0	0.3	-0.2	-0.1	0	0	0	-0.1	0.1	-0.1	0.1	-0.1	-0.2	-0.2	-0.1	0.1	-0.1	1.1	0
H	-0.2	0.1	0	-0.1	0.3	0	0	0	0.3	-0.1	0	0.6	0.3	0	-0.1	-0.2	-0.5	0	-0.4	0
N	-0.4	-0.1	0.7	0.3	-0.2	0.3	-0.1	0.2	-0.4	-0.1	-0.1	-0.4	0.8	-0.5	0.3	0.1	-0.4	0.4	0.4	-0.1
Q	-0.1	-0.1	0.5	-0.1	0.4	-0.1	0	-0.1	-0.5	0.3	-0.1	0	-0.2	0.5	-0.1	0.3	0.4	-0.2	-0.3	0
S	-0.4	0	-0.3	-0.2	0.7	-0.1	0	0	-0.3	0.2	0.5	0.2	0.3	-0.1	-0.2	0.4	0	-0.1	-0.5	0
T	0.3	-0.1	0.4	-0.1	0.4	-0.1	-0.1	-0.1	-0.1	-0.3	0.4	-0.1	0.1	-0.6	0.1	0.1	0.8	0.2	-0.9	-0.1
G	0.1	0	-0.5	-0.2	-0.1	0	0	0	0.6	0.3	-0.3	-0.4	-0.3	0.2	0	0.2	0.1	0.3	0.9	0
P	0.4	0	-0.2	0.1	0.2	0	0	0	0.2	-0.1	-0.2	-0.1	-0.1	0	0.1	-0.2	-0.3	0	0	0
C	0	0	0	0	-0.1	0	0	0	0	-0.1	-0.1	0	0	0	0	0	-0.2	0	-0.1	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0004	0.5	-1.1	-0.3	-0.7	0.1	-1.1	-1.3	-0.9	0.3	1.1	1.3	0.7	-0.1	0.8	0.9	0	0.6	0.6	-0.2	-1.3
0005	0.5	-1	0.5	-0.4	0.9	-0.9	-1.1	-0.9	0.1	1.3	0.5	0	-0.3	0	0.1	0.4	1.5	-0.6	0.9	-1.1

Select residue pair below:

i_j	Score	Prob
0005_0032	2.402	1.00
0005_0034	2.127	1.00
0005_0211	0.519	0.31
0005_0027	0.511	0.30

Local Interactions:

i_j	Score	Prob
0005_0007	1.710	1.00
0003_0005	0.986	0.92
0004_0005	0.966	0.91

See all coupling residues
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