OPENSEQ.org -1515599153- GREMLIN Submission

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Coupling matrix for [D:0002] and [K:0004]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.3	-0.1	-0.5	-0.3	-0.3	-0.2	-0.1	-0.2	1.1	0.8	0.3	0.3	-0.4	-0.4	0.3	-0.3	0.6	-0.1	0.4	-0.1
F	0.2	0	-0.1	0	-0.2	0	0	0	-0.3	0.3	0.1	-0.2	-0.1	-0.3	-0.1	-0.1	0	0.5	0	0
I	0	0	-0.1	0	-0.2	0	0	0	-0.1	-0.2	-0.6	0.4	-0.1	0.2	0.4	0.3	-0.2	-0.3	0	0
L	0.8	0	-0.1	0	-0.2	0	0	0	-0.3	0.6	-0.3	-0.2	-0.1	-0.3	-0.1	-0.1	-0.3	0.3	0	0
V	-0.3	0	-0.1	0	-0.2	0	0	0	-0.3	0.5	0.6	0.2	-0.1	-0.1	-0.3	-0.1	-0.3	0.2	0	0
M	-0.3	0	0	0	-0.1	0	0	0	0.3	0.1	-0.1	-0.1	0	-0.3	0.5	-0.1	-0.2	-0.2	0	0
W	0	0	0	0	-0.1	0	0	0	0	-0.1	-0.2	0	0	-0.1	-0.1	0	-0.1	-0.1	0	0
Y	-0.3	0	0	0	-0.2	0	0	0	-0.2	0.5	-0.5	-0.1	0	0.1	-0.2	-0.1	-0.2	1	0	0
D	-0.4	-0.1	0.3	-0.4	0.1	0.1	-0.1	-0.2	0.3	-1	0.7	-0.2	0.7	0.6	0.1	1	0.2	-0.4	0	-0.1
E	-0.5	-0.1	1.1	0.1	0.8	-0.2	-0.1	-0.2	-0.5	-0.3	0.5	0.5	-0.3	0	0	0.2	0.7	-0.3	-0.4	-0.1
K	-0.3	-0.1	0.4	0.2	0.7	-0.1	-0.1	-0.1	-0.1	0.4	-0.6	-0.3	0.1	0.3	0.5	-0.2	0.7	0	-0.1	-0.1
R	-0.3	0	0	0	0.8	0	0	0	0	0.1	-0.1	-0.1	-0.1	-0.3	0.1	-0.1	-0.2	-0.2	0	0
H	0.4	0	-0.1	0	0	0	0	0	0.5	0.3	-0.5	-0.2	0.4	-0.4	0.3	-0.2	-0.4	-0.3	-0.1	0
N	-0.6	0.4	-0.3	-0.2	0.4	-0.1	0	0.1	0	-0.3	0.5	-0.1	0.3	0.1	-0.1	-0.4	0.2	0.1	0.2	0
Q	0.2	-0.1	-0.3	0.4	0.3	-0.1	0	-0.1	-0.3	0.1	0.3	0.1	0	0.1	0.6	-0.1	-0.6	0.2	-0.1	0
S	0	-0.1	0.1	-0.2	-0.3	0.3	-0.1	-0.1	0.5	0.3	0.7	0.2	0.2	0.3	-0.7	-0.3	-0.2	0.3	-0.1	-0.1
T	0.5	0	-0.2	0.3	-0.3	0	0	0	0	-0.5	0.2	0	-0.2	0.1	0.2	0.3	0	0.1	-0.1	0
G	0	-0.1	-0.4	0.2	0.2	-0.1	-0.1	0.3	0.1	-0.6	-0.1	0.8	-0.3	0.4	-0.1	-0.6	1	-0.2	0.5	-0.1
P	1.3	0	-0.1	-0.1	-0.2	0	0	0.4	-0.4	-0.7	0	-0.1	-0.2	0.4	0	0.4	-0.3	-0.3	-0.1	0
C	-0.1	0	0	0	-0.1	0	0	0	-0.1	-0.1	-0.2	0	0	-0.1	-0.1	0	-0.1	-0.1	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0002	1.5	-1	-1.2	-1.1	-0.8	-1.3	-1.8	-1.2	2	2	1.5	-1	-0.8	0.7	0.7	1.1	0.2	1.3	0	-1.9
0004	0.5	-1.1	-0.3	-0.7	0.1	-1.1	-1.3	-0.9	0.3	1.1	1.3	0.7	-0.1	0.8	0.9	0	0.6	0.6	-0.2	-1.3

Select residue pair below:

i_j

Score

Prob

Local Interactions:

i_j	Score	Prob
0002_0004	1.749	1.00
0002_0003	1.280	0.99

See all coupling residues
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