OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [M:0245] and [S:0255]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	-0.2	0.6	0.5	1	-0.1	-0.1	-0.3	-0.2	-0.3	-0.3	0.2	-0.4	-0.3	-0.1	-0.4	0	0.5	0.3	-0.2
F	-0.2	0.2	0.1	0.3	-0.4	-0.1	-0.1	0.7	-0.5	-0.6	-0.2	-0.4	0.4	0.4	0.3	0.2	0.1	-0.1	-0.3	-0.1
I	-0.7	-0.1	-0.2	-0.7	0.5	0.3	-0.1	0.9	0.2	-0.3	0.2	-0.1	-0.5	0.8	-0.1	0.1	-0.1	0.4	0	-0.3
L	-0.1	0.8	0.4	-0.2	-0.3	-0.4	-0.2	0.5	-0.1	0.2	0.4	0.7	0.3	-0.4	-0.2	-0.3	0.1	-0.1	-0.1	-0.3
V	-0.1	0	-0.1	0.1	-0.3	0.3	0.5	-0.4	0.2	-0.2	0.5	-0.1	-0.5	0.4	0.1	-0.4	0.3	0.7	-0.8	0.2
M	0	-0.1	-0.2	0.1	-0.3	-0.1	0	0.3	0.3	0	0.6	-0.1	-0.3	0.2	0.2	0.1	-0.7	-0.1	0	-0.1
W	-0.2	-0.1	-0.2	0	-0.4	-0.1	-0.1	-0.3	-0.2	-0.1	0.7	0.8	0.7	-0.2	1	0.3	-0.3	-0.3	0.1	0.2
Y	0.2	-0.1	-0.2	-0.3	-0.2	-0.1	-0.1	0	0.4	0.6	-0.5	-0.4	-0.3	0.1	0.2	0.3	-0.4	0.7	0	-0.1
D	0.3	0	0	0	-0.1	0	0	0	-0.4	-0.1	0.3	-0.1	0	-0.1	0	-0.1	0	-0.2	-0.1	0
E	-0.2	-0.1	-0.1	-0.1	0.2	0.4	0	-0.1	0.1	0.2	-0.2	0	0	-0.3	-0.1	-0.3	0.3	0.1	-0.3	0
K	0.2	-0.2	-0.3	-0.2	0.5	0.1	-0.1	-0.3	0.7	0.7	-0.4	0.1	-0.4	0.2	-0.3	0.3	0.5	-0.4	-0.4	0.4
R	0.6	0	-0.5	0.6	0	-0.3	-0.1	-0.2	0.3	0.8	-0.8	-0.3	0.1	-0.6	0	0.5	0	0.3	0.3	-0.3
H	0.5	-0.1	0.1	0	0.1	-0.1	-0.1	0.1	0.4	-0.2	-0.1	0.1	0.5	0	-0.5	-0.3	0	0.2	0	-0.1
N	-0.2	0	-0.1	-0.1	-0.2	0	0	-0.1	-0.3	0.2	-0.2	0	0.2	0.1	-0.1	-0.2	0.1	0.5	0.1	0
Q	0.3	-0.2	-0.3	0.3	0	-0.1	-0.1	-0.2	-0.1	-0.2	-0.3	-0.6	-0.3	0.3	-0.2	0.8	0.1	-0.5	0.7	0.4
S	0.1	-0.1	-0.1	0.2	0.3	-0.1	0	-0.1	-0.2	-0.3	0.3	0.8	0.2	0.3	-0.2	-0.4	0	-0.7	-0.2	0.3
T	0.1	-0.2	0.2	-0.8	0	0	-0.2	-0.7	0.2	0	-0.3	0	0.4	0.2	0.4	0.7	0.3	0.7	0.2	-0.4
G	-0.2	0	0.4	0.3	-0.2	0	0	-0.1	-0.3	0.2	0.2	0	-0.1	-0.2	-0.1	-0.3	0.2	-0.5	0.7	0
P	0	0	0	0	0	0	0	0	-0.1	0	0	-0.1	0	-0.1	0	-0.1	-0.1	-0.1	0	0
C	-0.1	0	0	0	-0.1	0	0	0	-0.3	-0.1	0.4	-0.1	-0.1	-0.1	-0.1	0	0.1	-0.2	0.3	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0245	0.2	0	0.4	1	0.6	0.2	0.5	0	-1.1	-0.1	0.8	0.9	0.1	-0.6	0.5	0	0.9	-0.6	-1.5	-1.2
0255	0.4	-1.2	-0.8	-0.3	-0.2	-1.1	-1.7	-0.9	1.8	0.6	0.3	0.7	-0.5	0.7	0.1	1.1	0.9	1.1	0.5	-1.4

Select residue pair below:

i_j	Score	Prob
0203_0245	1.627	1.00
0055_0245	0.888	0.85
0242_0245	0.845	0.81
0054_0245	0.798	0.75
0245_0255	0.567	0.38
0245_0256	0.550	0.35

Local Interactions:

i_j	Score	Prob
0244_0245	0.614	0.46

See all coupling residues
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