OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [A:0233] and [R:0234]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.5	-0.1	-0.1	-0.2	0.3	0.3	0	-0.1	-0.1	0.3	0.3	-0.4	0	0.3	0.2	0.6	0.2	-0.5	-0.2	-0.1
F	0.2	0.3	-0.1	-0.1	-0.1	-0.1	0	-0.1	0.5	0.1	0.3	0.2	-0.1	-0.1	-0.2	-0.3	-0.3	0.2	-0.2	0.5
I	0.5	-0.2	0	-0.5	-0.2	-0.1	-0.1	-0.3	0.3	-0.3	0.1	0.5	-0.2	0.4	-0.3	-0.1	-0.1	1	0.2	-0.2
L	0.3	-0.2	0	0.1	0	-0.3	-0.1	0.5	0.5	-0.1	0.1	0.1	0.1	0.7	-0.3	-0.1	0.5	0.4	-0.1	-0.4
V	1	-0.2	0	0.1	-0.1	0.2	-0.1	-0.2	0	0	-0.5	-0.1	0.2	-0.4	-0.2	0.2	0.7	0	-0.3	0.1
M	-0.1	-0.1	0.3	0	0	-0.1	-0.1	-0.1	-0.5	0.4	0.3	0.4	0.2	-0.3	0.5	0	-0.4	0	0.2	-0.1
W	-0.4	0	0	-0.1	0	0	0	0	0.3	0.6	-0.1	-0.5	0.4	0.2	0.4	-0.2	-0.2	-0.2	0	0
Y	-0.4	0	0	0.3	0	0	0	0	0.3	0.1	0	0.7	-0.2	-0.2	0.2	-0.1	-0.2	-0.1	-0.1	0
D	-0.1	0	0	0	0	0	0	0	-0.1	0	-0.1	-0.1	0	0	-0.1	0.4	0	-0.1	0	0
E	-0.1	0	0	0	0	0	0	0	-0.1	-0.2	-0.1	-0.1	0	0.4	-0.1	0	0	0	0	0
K	-0.1	0	0	0	0	0	0	0	-0.1	0.1	-0.1	-0.1	0	0	-0.1	0	0	0	0	0
R	-0.1	0	0	0	0	0	0	0	-0.2	0.1	-0.1	-0.1	0	0	0.3	0	0	-0.1	0	0
H	-0.2	0	0	-0.1	0	0	0	0	0.4	-0.4	0.3	0.1	-0.1	-0.2	0	-0.1	-0.1	0.2	-0.1	0
N	-0.1	0	0	0	0	0	0	0	-0.3	-0.2	0.1	0.2	-0.1	-0.1	0.2	-0.1	0	-0.1	0	0
Q	-0.2	0	0	-0.1	0	0	0	0	-0.1	0.1	0.5	-0.4	0.1	0.3	0	0	-0.1	-0.1	0	0
S	0.2	0	0	0.4	0	0	0	0	-0.1	0	0.1	-0.2	-0.1	-0.1	-0.3	-0.1	-0.1	-0.1	0	0
T	0.4	0	-0.1	-0.1	0	0	0	0	-1	0.3	-0.4	0.3	-0.1	-0.3	0	0.4	0.2	0	0.5	0
G	0.2	0	0	0	0	0	0	0	0.1	-0.2	-0.1	-0.1	0	0	-0.1	0	0	0	0	0
P	0	0	0	0	0	0	0	0	-0.1	-0.1	0	-0.1	0	0	-0.1	0	0	0	0	0
C	-0.1	0	-0.1	-0.1	-0.1	-0.1	0	-0.1	0.9	0.6	-0.1	-0.1	0.1	-0.2	0.4	-0.2	0	-0.4	-0.3	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0233	0.5	1.3	0.9	2.8	0.7	1.2	0.3	0.4	-0.7	-0.9	-0.9	-0.7	-0.4	-0.7	-0.6	-0.6	0.1	-0.8	-1.1	0.1
0234	1.1	-1.1	-0.7	-0.3	-0.8	-0.8	-1.2	-0.9	1.1	2.1	1.3	0.8	0.1	0.4	1.3	0.4	0.2	0.2	-0.8	-0.9

Select residue pair below:

i_j	Score	Prob
0234_0263	3.578	1.00
0234_0267	1.667	1.00
0234_0238	1.485	1.00
0234_0237	0.879	0.84
0231_0234	0.798	0.75
0230_0234	0.735	0.66

Local Interactions:

i_j	Score	Prob
0233_0234	0.589	0.42

See all coupling residues
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