May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
India-Argentina Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [D:0223] and [A:0224]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.5 -0.6 -0.1 0.3 -0.3 -0.2 -0.2 -0.3 0.7 0.5 1.1 0.4 0.4 0.4 0.8 -1.1 -0.5 0.5 -0.4 -0.5
F 0.6 -0.3 -0.1 0.2 -0.3 -0.1 -0.1 -0.1 -0.1 0 -0.2 -0.2 0.4 -0.1 -0.2 1.1 -0.1 0.2 -0.4 -0.3
I -0.4 0.6 -0.1 -0.2 -0.2 0.3 -0.1 -0.1 0.2 0.2 -0.2 -0.2 -0.1 0.1 0.2 -0.2 0.2 -0.4 0.6 -0.2
L -0.5 0.2 -0.1 0 0.8 0.3 -0.2 -0.2 0.2 0.5 0.2 -0.3 -0.2 0.2 -0.3 -0.3 -0.2 -0.9 1 -0.3
V -0.3 0.3 0 -0.1 -0.1 -0.1 -0.1 0.3 0.7 0.1 0 -0.1 -0.1 -0.1 -0.1 -0.2 -0.3 0 0.1 -0.1
M -0.8 -0.3 -0.1 0.1 -0.3 -0.1 -0.1 -0.1 -0.4 0 -0.3 -0.3 -0.1 -0.2 0.2 -0.9 -0.2 1.7 2 0.1
W -0.8 0.5 -0.1 0.2 -0.3 -0.1 2.2 1 -0.4 -0.3 -0.2 -0.3 -0.1 -0.1 -0.1 0.3 -0.5 -0.6 -0.3 -0.2
Y 0.2 0.4 -0.1 0.5 0 -0.2 -0.1 0.3 0.7 -0.2 -0.3 0.9 -0.2 0.5 -0.3 -0.6 0 -0.9 -0.8 0.7
D 1.2 -0.8 -0.5 -0.6 -0.1 0.2 -0.6 -0.6 -1.2 -0.7 0.8 1.6 -0.5 -0.7 0.3 0.6 0.9 1 0.7 0.4
E 0.8 -0.3 0.2 -0.6 -0.3 -0.3 0 -0.2 -0.8 -0.5 0.1 0.5 0.9 -0.5 -0.4 0 0.5 0.9 0.7 -0.3
K -0.3 0.3 -0.1 -0.2 2.3 -0.1 -0.2 0.2 0.2 0.5 -0.2 -0.1 -0.1 0 0.1 -0.3 -0.7 -0.7 -0.4 -0.3
R -1.4 0.9 0.2 0.6 0.1 -0.1 -0.2 0.6 0.3 0.2 0.1 -0.3 0.7 -0.2 -0.3 -0.2 0.6 -0.9 -0.2 -0.3
H 1.5 -0.5 0.3 0 -0.6 -0.2 -0.2 0 -0.6 -0.4 -0.2 -0.5 -0.1 -0.3 0.1 0.5 0.5 0.5 0 0.1
N 0.8 -0.6 -0.1 -0.3 1 -0.1 -0.2 -0.2 0.3 0.1 0.1 -0.3 -0.1 -0.1 -0.3 0.7 0 -0.1 -0.1 0.1
Q 0.8 -0.2 -0.1 -0.2 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.2 0.7 -0.5 -0.1 0.4 -0.2
S -0.3 0.8 0.3 -0.4 0 -0.2 -0.3 -0.2 -0.1 0.7 0 0.2 -0.2 0.1 0.9 -0.3 0 0.4 -0.7 -0.1
T 0.1 0.1 0.2 -0.5 -0.2 0.1 0.8 -0.1 0.8 0.1 0.7 -0.3 -0.2 0 0 -0.1 -0.7 -0.1 -0.5 0.6
G 0.9 -0.5 -0.1 0.8 -0.6 0.5 -0.3 0 -0.4 -0.5 -0.8 -0.8 -0.2 -0.1 0.5 0.4 0.9 1.1 -0.3 0.6
P 0.1 0.1 -0.1 0.5 0 -0.2 -0.1 -0.3 1.1 0.6 -0.3 0.3 -0.2 0.6 -0.2 0.3 -0.3 -1 -0.5 -0.2
C -0.2 -0.2 0 0.3 -0.2 0 0 0.4 -0.2 -0.2 -0.1 -0.1 0 0.8 -0.1 0.1 -0.3 -0.6 -0.2 0.3
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0223 0.1 -0.6 -0.3 -0.1 -0.6 -0.5 -0.4 0.1 1.3 0.9 -0.3 -0.1 -0.2 0.1 -0.5 0.6 0.7 0.9 0.2 -1.2
0224 1.5 0.3 -1.3 -0.3 -0.1 -1.1 -0.9 -0.6 0.5 0.3 -0.3 -0.1 -1.1 -0.7 -0.3 1.6 0.8 1.9 0.4 -0.2
Select residue pair below:
i_j Score Prob
0219_0224 0.779 0.73
Local Interactions:
i_j Score Prob
0223_0224 0.661 0.54
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...
Page generated in 0.0133 seconds.