OPENSEQ.org -1515595952- GREMLIN Submission

May 4, 2021 - We are working on upgrading the webserver, some pages may not work.

India-Argentina

Return to Main Page

Instructions

Use the menu to the right to browse the coupling matrix.

Coupling matrix for [D:0212] and [S:0249]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	-0.1	0	0	0	0.6	0	-0.1	-0.1	-0.1	0	0	-0.1	-0.3	0.1	0.7	-0.3	0.3	-0.2	-0.1
F	0	0	0	0	0	-0.2	0	0	0	0	0	0	-0.1	-0.1	-0.1	0.6	-0.1	0.1	-0.1	-0.1
I	-0.6	0.3	0	0	0	-0.2	0	0.4	-0.1	-0.1	0	0	0.2	0.7	-0.1	-0.4	-0.2	0.4	-0.1	-0.1
L	0.1	0	0	0	0	0	0	0	-0.1	0	0	0	0.6	-0.2	-0.1	-0.3	0.3	0	-0.1	-0.1
V	0.1	0.4	0	0	0	-0.2	0	0.4	-0.1	-0.1	0	0	0.3	-0.3	-0.1	0.1	-0.3	0.5	-0.2	-0.1
M	-0.2	0	0	0	0	-0.1	0	0	0.4	0	0	0	0	-0.1	0	-0.3	-0.1	-0.1	0	0
W	1.1	0	0	0	0	-0.1	0	0	-0.1	-0.2	0	0	0	-0.2	-0.1	-0.8	-0.1	-0.1	0.4	-0.1
Y	-0.3	0	0	0	0	-0.2	0	0	0.4	-0.1	0	0	0	-0.1	-0.1	0.8	-0.2	0	-0.1	-0.1
D	0.7	-0.1	0	0	-0.1	-0.5	0	-0.1	0.2	0.7	0	-0.1	-0.2	0.8	-0.2	0.2	-0.2	-0.7	-0.2	0.5
E	0.7	0	0	0	0	-0.5	0	-0.1	-0.1	-0.1	0	0	-0.1	0.1	-0.1	-0.5	0.1	1	-0.1	-0.1
K	-0.3	0	0	0	0	-0.1	0	0	-0.1	0.4	0	0	-0.1	-0.2	-0.1	0.1	0.3	0.2	0	-0.1
R	-0.4	0	0	0	0	0.3	0	0	-0.2	0.2	0	0	0	-0.2	-0.1	0.2	0.4	0.1	-0.1	-0.1
H	-0.9	-0.1	0	0	0.4	1.2	0	-0.1	-0.1	-0.1	0	-0.1	-0.1	-0.3	0.1	-0.4	-0.3	-0.1	0.9	0.3
N	0.6	0	0	0	0	-0.2	0	0	0.3	-0.1	0	0	-0.1	-0.1	-0.1	-0.9	-0.2	0.8	-0.1	-0.1
Q	-0.2	0	0	0	0	1.9	0	0	-0.1	-0.1	0	0	-0.1	-0.2	0.2	-0.3	-0.2	-0.4	-0.1	-0.1
S	-0.5	-0.1	0	0	0	-0.1	0	-0.1	-0.2	-0.1	0	0	0.2	0.6	-0.2	0	0.9	0.3	-0.1	-0.1
T	-0.3	-0.1	0	0	0	-0.1	0	-0.1	-0.1	0.3	0	0	-0.1	-0.2	-0.2	-0.1	0.7	0.1	-0.2	0.7
G	0.5	-0.1	0	0	-0.1	-0.7	0	-0.1	0.5	-0.3	0	0.4	-0.2	0.9	1.6	-0.4	-0.4	-0.7	-0.2	-0.3
P	1.2	-0.1	0	0	0	-0.8	0	-0.1	-0.2	-0.1	0	0	-0.1	-0.2	-0.1	1.8	-0.3	-0.6	-0.1	-0.1
C	-0.4	0	0	0	0	-0.1	0	0	0	0	0	0	0	0.3	-0.1	0.2	0.3	-1.2	0.7	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0212	0.4	-0.6	-0.2	0.1	0.2	-1.1	-0.8	-0.1	1	0.2	-0.6	-0.1	0.4	-0.2	0.3	0.8	0.4	0.8	0.4	-0.7
0249	1.4	-0.2	-0.6	-0.6	-0.4	-0.4	-0.6	-0.3	0.4	0.1	-0.6	-0.3	-0.2	0.6	0.1	0.6	0.3	1	0.1	0

Select residue pair below:

i_j	Score	Prob
0212_0249	0.916	0.87
0188_0249	0.909	0.87
0208_0249	0.818	0.78
0075_0249	0.728	0.65
0125_0249	0.708	0.62
0078_0249	0.627	0.48

Local Interactions:

i_j	Score	Prob
0249_0250	0.565	0.38

See all coupling residues
Download raw data

Page generated in 0.019 seconds.