May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
India-Argentina Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0209] and [K:0211]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.6 -0.1 0 0 0.7 -0.1 0.5 -0.2 0 -0.1 0 -0.1 0.2 -0.7 -0.4 0.3 -0.2 1 0.6 0.4
F 0 -0.3 1.1 -0.2 -0.2 -0.4 -0.3 -0.4 0.4 -0.1 1 0.1 0.3 -0.3 0.1 -0.6 -0.1 0.3 -0.1 -0.1
I -0.3 0.9 -1 -0.7 -0.2 0.6 -0.6 0.7 0.8 -0.5 0.3 -0.2 -0.3 -0.7 0.6 0.5 0.2 -0.2 -0.4 -0.2
L -0.1 1.3 -0.2 -1.3 -0.4 -0.1 -0.9 -0.2 -0.4 1.4 0.6 0.3 0.5 0 0.1 -0.1 1 0.8 -0.8 -0.7
V -0.2 0.3 -0.4 -0.1 -0.2 0.6 0.5 0.2 -0.1 -0.1 -0.9 -0.2 0.2 0.3 0 0 -0.5 0.4 0.1 -0.2
M -0.3 0.5 -0.5 0.9 0.2 0.4 -0.2 -0.6 -0.1 -0.1 0.8 0.6 -0.3 0.3 0 -0.4 -0.5 0.1 -0.2 -0.1
W -0.1 -0.2 -0.1 0.9 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 0 0 -0.1 -0.1 0.3 -0.1 0
Y 0.3 -0.2 -0.1 -0.2 -0.1 -0.1 -0.1 -0.2 0 -0.1 -0.1 0 -0.1 0 0 0.3 0.2 -0.3 -0.1 0.5
D -0.1 -0.4 -0.1 0.2 0.3 0 0 0.3 0 -0.1 -0.1 0 0 0 0 -0.1 -0.1 -0.1 0 0
E 0 -0.1 0 -0.1 0 0 0 -0.1 0 0 -0.1 0.4 0 0 0 0 0 -0.1 0 0
K 0 -0.1 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 -0.1 0 0
R 0 -0.1 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 -0.1 0 0
H 0.4 0.3 -0.2 1.1 -0.3 -0.3 1 -0.1 -0.1 -0.6 -0.3 -0.1 -0.3 0.1 -0.1 0 0 -0.5 -0.3 0.3
N 0.2 -0.7 -0.5 -0.1 0.4 0.5 -0.8 0.8 -0.3 0.3 -0.2 -0.1 -0.3 -0.1 -0.3 -0.5 0.7 0.3 0.2 0.3
Q -0.3 -0.1 1.4 1.4 0.1 0.1 -0.2 -0.6 -0.1 -0.6 -0.3 -0.1 -0.4 0.2 0.2 -0.1 0.3 -0.4 -0.2 -0.1
S 0.6 -0.6 -0.1 -0.5 0 -0.3 -0.1 0.4 0.5 -0.3 -0.3 -0.1 0.6 0.4 0.2 0.4 -0.3 -0.2 0.4 -0.1
T -0.5 0 -0.3 -0.5 -0.7 -0.2 1.6 -0.1 -0.2 1.5 -0.4 -0.2 0.7 0.8 -0.2 -0.5 -0.2 0.3 0.1 -0.1
G 0.7 -0.2 -0.1 -0.3 0 -0.1 -0.1 -0.6 -0.1 -0.1 -0.1 0 -0.1 0 0 0.7 -0.1 -0.1 0.2 0
P 0.7 -0.5 1.4 -0.2 0.5 -0.2 -0.1 -0.4 -0.1 -0.2 -0.1 -0.1 -0.2 -0.2 -0.2 0 -0.2 -0.6 0.9 -0.1
C 0 -0.2 -0.2 0.1 -0.1 -0.1 -0.2 1.4 -0.1 -0.2 -0.1 0 -0.2 -0.1 -0.1 0.3 -0.2 0.1 -0.2 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0209 0.6 0.8 1.2 0.8 0.9 0.3 -0.3 -0.6 -0.6 -0.9 -1 -1 -0.2 0.5 0.2 0.7 0.9 -0.7 -0.1 -0.4
0211 0.8 -0.7 0.5 0.4 -0.2 -0.2 -0.3 -0.2 -0.1 -0.1 -0.6 -0.2 0.2 -0.1 -0.3 0.6 0 1.9 0 -0.7
Select residue pair below:
i_j Score Prob
0208_0211 0.753 0.69
0211_0226 0.725 0.65
0063_0211 0.712 0.63
Local Interactions:
i_j Score Prob
0209_0211 0.838 0.80
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...
Page generated in 0.0126 seconds.