OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [C:0208] and [S:0249]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0	0	0	0	0	-0.1	0	0	0	0.5	0	0	0	1	-0.2	-0.1	0	-0.5	-0.1	0
F	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0
I	-0.1	0	0	0	0	0	0	0	0	-0.1	0	0	0	0	0	0.1	0	0.2	0	0
L	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0
V	0.4	0	0	0	0	0	0	0	0	-0.1	0	0	0	-0.1	-0.1	0	0	-0.1	0	0
M	0.2	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	-0.1	0	0	0	0
W	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0
Y	0.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	-0.1	0	0
D	-0.2	0.2	-0.2	-0.2	-0.3	0.7	-0.2	0	0.2	-0.5	-0.2	-0.2	0.2	-1.2	0.8	0.5	0.3	1.1	-0.5	0.2
E	0.4	0	0	0	0	-0.2	0	-0.1	-0.1	0	0	0	-0.1	-0.7	0.3	-0.2	-0.2	0.2	0.9	-0.1
K	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0.1	0.3	-0.1	0	-0.2	0	0
R	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0
H	0.1	0	0	0	0	0	0	0	0	-0.1	0	0	0	0.2	0	0.2	0	0	0	0
N	-0.1	0	0	0	0	0	0	0	0	0.2	0	0	0	-0.1	-0.1	-0.4	-0.1	1.1	0	0
Q	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0
S	0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.2	0	0
T	0.2	0	0	0	0.4	0	0	0	0	0	0	0	0	0	0	-0.1	0	-0.3	0	0
G	-0.1	-0.1	0	0	-0.1	-0.1	0	0	0.1	-0.1	0	0.2	-0.1	1	-0.3	0.6	0.4	-0.6	-0.1	-0.1
P	-0.1	0	0	0	0	0	0	0	0	0.3	0	0	0	0	0	-0.1	0	-0.2	0	0
C	-0.3	-0.1	0	0	-0.1	-0.2	0	0	0.2	0	0	0	-0.1	0.3	-0.4	0.2	-0.1	0.6	-0.1	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0208	0.7	-0.4	-0.1	-0.4	0	-0.2	-0.4	-0.1	0.6	0.2	0	-0.4	0.2	0.9	-0.4	-0.3	-0.1	1.3	-0.1	-0.5
0249	1.4	-0.2	-0.6	-0.6	-0.4	-0.4	-0.6	-0.3	0.4	0.1	-0.6	-0.3	-0.2	0.6	0.1	0.6	0.3	1	0.1	0

Select residue pair below:

i_j	Score	Prob
0125_0208	1.881	1.00
0120_0208	1.641	1.00
0090_0208	1.140	0.97
0189_0208	1.124	0.97
0124_0208	1.084	0.96
0208_0250	1.012	0.93
0208_0249	0.818	0.78
0208_0211	0.753	0.69

Local Interactions:

i_j

Score

Prob

See all coupling residues
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