OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [G:0206] and [I:0246]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.3	0	0.8	0.5	0.7	0.2	0.5	-0.3	-0.1	-0.3	-0.3	-0.1	-0.1	-0.1	0.2	0.1	0.2	-0.1	-0.2	-0.2
F	-0.2	-0.2	0	0.6	0.1	-0.1	-0.1	-0.3	0	0	0	0	0	0	0	0	0	0	0	0
I	0.1	-0.1	-0.3	0.1	-0.3	0.3	-0.1	0.3	0	-0.2	0.4	0	0	0	0	-0.1	-0.1	-0.1	0	0.7
L	0.3	0.7	-0.3	-0.4	0.5	-0.6	-0.1	1.7	0	-0.1	-0.1	0	0	0	-0.1	-0.1	-0.3	-0.1	-0.1	-0.1
V	-0.3	0	0.3	0.1	0.1	0.7	1.4	-0.5	-0.1	-0.1	0.1	-0.1	-0.1	-0.1	-0.1	-0.3	-0.3	-0.2	-0.1	0.4
M	0.8	0.6	0.6	-1	0.5	-0.1	-0.4	-0.3	0	0.8	-0.1	0	0	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.3
W	-0.1	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Y	0.8	-0.1	-0.2	-0.3	-0.2	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0
D	-0.1	-0.1	-0.1	-0.2	-0.2	0	0	-0.1	0	0	0	0	0	0	0	0.5	0	0	0	0
E	-0.1	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
K	-0.1	-0.1	-0.2	0.2	-0.3	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0
R	-0.1	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
H	-0.1	0.4	-0.2	-0.2	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
N	-0.2	0.3	-0.2	-0.2	-0.2	-0.1	0	-0.1	0	0.4	0	0	0	0	0	0	0	0	0	0
Q	0.2	-0.2	1.1	-0.4	-0.4	-0.1	0	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	-0.1
S	-0.6	-0.2	0.7	0.5	1	0.7	-0.3	-0.8	-0.1	-0.2	-0.2	-0.1	-0.1	-0.1	-0.1	-0.1	0	0.1	-0.1	0.3
T	-0.2	-0.1	0.7	0.2	0.8	-0.3	-0.2	0.3	-0.1	-0.1	-0.2	-0.1	-0.1	-0.1	-0.2	0.4	0	0.1	-0.1	0.3
G	-0.5	-0.3	0.5	0.1	1.5	-0.2	-0.2	-0.4	0	-0.1	-0.1	0	0	0	-0.1	-0.1	0.4	0.3	-0.1	-0.3
P	0.8	0.2	-0.7	0.3	-0.6	0.4	-0.1	-0.4	0	0	-0.1	0	0	0	0	0	0.2	0	0	-0.1
C	0.6	0	-0.8	1.1	-1.1	-0.5	-0.2	1.7	0	-0.1	-0.1	0	0	0	0	-0.1	0.1	-0.1	0.4	-0.3

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0206	1.7	-0.4	1.1	1.3	1.7	1	-1.2	-0.6	-0.9	-1.2	-1.1	-1.2	-1	-0.8	-0.4	0.6	1.6	0.4	-0.5	0.6
0246	1.7	1.4	2.2	2	1.9	0.4	0	1	-1.1	-0.4	-1	-1.1	-1.1	-1.1	-1	-0.6	-0.3	-0.7	-1	-0.1

Select residue pair below:

i_j	Score	Prob
0204_0246	1.355	0.99
0246_0254	0.781	0.73
0206_0246	0.760	0.70
0187_0246	0.624	0.48

Local Interactions:

i_j

Score

Prob

See all coupling residues
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