OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [I:0203] and [V:0247]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.4	0.7	0.2	0.9	0.1	0.6	-0.1	0.1	0	0	-0.1	-0.1	-0.2	-0.1	0	-0.1	-0.1	-0.3	0	-0.5
F	0.2	0	-0.4	0.1	-0.4	0.2	-0.1	0.1	0	0	0	0	-0.2	-0.1	0	0	0	0.8	0	-0.1
I	0.1	-0.7	0.6	0.1	0.6	0.1	0.4	-0.4	-0.1	-0.1	0.1	-0.2	-0.2	0.2	-0.1	0.1	0.1	-0.2	-0.1	0.6
L	-0.6	0.1	0.6	0.8	0.6	0.1	0.6	0	0	0	-0.1	-0.1	-0.4	-0.2	0	-0.1	-0.1	-0.3	0	0.1
V	0.8	-0.3	0.7	0.3	1.3	0.2	-0.5	-1.1	-0.1	-0.1	0.2	0.3	-0.9	0	-0.1	0.6	-0.3	-0.5	-0.1	0.6
M	-0.3	-0.1	0.7	-0.4	-0.1	0.1	0	-0.3	0	0	0	0	-0.2	1.2	0	-0.1	0	-0.3	0	0.1
W	0.2	0.8	0	0	-0.4	-0.1	0	0	0	0	0	0	-0.1	-0.1	0	0	0	-0.1	0	-0.2
Y	0.2	0.7	-0.1	0.3	-0.7	0.1	-0.1	0.4	0	0	0	-0.1	-0.3	-0.4	0	-0.1	-0.1	0	0	0.4
D	-0.1	-0.1	-0.3	-0.4	-0.3	-0.1	0	0.5	0	0	0	0	0.7	0	0	0	0	-0.1	0	-0.1
E	-0.2	0	-0.5	0.2	-0.5	-0.1	0	1	0	0	0	0.4	0.3	0	0	0	0	-0.1	0	-0.4
K	-0.1	0.3	0.1	0.1	-0.5	-0.1	0	-0.2	0	0	0	-0.1	-0.2	0	0	0	0.7	-0.1	0	-0.1
R	-0.1	0.5	0	-0.4	0.2	0	0	-0.2	0	0	0	0	-0.1	-0.1	0	0	0	-0.1	0	-0.1
H	-0.2	-0.2	-0.5	-0.6	-0.4	-0.1	0	0.4	0	0	0	-0.1	1.1	-0.2	0	-0.1	0	1.1	0	-0.2
N	-0.1	-0.1	-0.2	0	-0.2	0	0	-0.1	0	0	0	0	-0.1	0	0	0	0	0	0	0.3
Q	-0.1	-0.1	-0.3	0.1	-0.2	0	0	-0.2	0	0	0	0	0.8	0	0	0	0	0	0	-0.1
S	-0.4	0.3	-0.2	-0.2	-0.1	-0.1	0	0.8	0	0	0	0	0.1	0	0	0	0	-0.1	0	-0.2
T	1.1	-1.2	1	-0.1	1.4	-0.5	-0.2	-1.1	0	0	-0.1	-0.1	0.3	-0.2	0	-0.1	-0.1	0.3	0	0.2
G	-0.1	0.2	-0.1	0	-0.3	0	0	0.2	0	0	0	0	-0.1	0	0	0	0	0	0	-0.1
P	0	0	-0.1	-0.1	-0.1	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0
C	0.3	-0.2	-0.5	-0.1	0.2	-0.1	0	0.5	0	0	0	0	-0.2	-0.1	0	0	0	0.3	0	-0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0203	0.9	0.1	2	1.4	2.1	0.1	-0.4	0.3	-0.7	-0.4	-0.5	-0.7	-0.1	-1	-0.6	-0.3	0.9	-0.5	-1.2	-0.3
0247	0.2	1	1.8	1.1	0.5	0.4	-0.3	0.8	-0.8	-0.8	-0.5	-0.4	0.2	-0.3	-0.8	-0.3	-0.3	0.2	-0.8	-0.5

Select residue pair below:

i_j	Score	Prob
0054_0247	0.941	0.89
0077_0247	0.798	0.75
0203_0247	0.776	0.72
0078_0247	0.666	0.55
0058_0247	0.657	0.53
0205_0247	0.652	0.53
0193_0247	0.619	0.47
0247_0253	0.598	0.43

Local Interactions:

i_j

Score

Prob

See all coupling residues
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