OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [D:0202] and [I:0203]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	0.1	-0.3	0.7	-0.3	-0.2	-0.1	0	0.2	-0.1	-0.1	-0.1	0	0	-0.1	-0.2	0.3	-0.1	0	0.3
F	-0.1	0	0	-0.2	-0.1	0.4	0	0	0	0	0	0	0	0	0	0	-0.3	0	0	0
I	0	0	-0.1	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
L	-0.1	0	-0.3	-0.2	-0.2	0.3	0	-0.1	0	0	0	0	0.1	0	0.2	0	0.2	0	0	0
V	-0.1	0	-0.2	-0.2	0.2	0	0	0	0	0	0	0	-0.1	0	0.3	0	-0.1	0	0	0
M	-0.1	-0.1	-0.1	-0.3	-0.4	0.2	0.3	0	0	0.4	0	0	0.2	0	0	0	0	0	0	-0.1
W	0	0	0.2	-0.1	-0.3	0	0	0	0	0	0	0	0	0	0	0	-0.2	0	0	0
Y	-0.1	-0.1	0	0.1	-0.2	-0.1	0	-0.1	0	-0.1	0	0	-0.1	0	0.7	0	-0.2	0	0	0
D	0.6	0.5	0	-0.1	0.3	-0.3	0.2	-0.4	-0.1	0	-0.1	-0.1	-0.2	0	-0.1	-0.2	0.2	-0.1	0	0.3
E	0.4	-0.2	-0.3	-0.4	0.5	-0.1	-0.1	-0.2	-0.1	-0.1	-0.1	0.4	0.2	0	-0.1	0.1	0.3	0	0	-0.1
K	0.5	0.1	0.6	0.2	0.5	-0.1	0.4	-0.7	-0.2	-0.3	-0.4	0.3	-0.5	-0.2	-0.2	0.1	0.6	-0.3	-0.1	0.1
R	0.6	0.4	0.3	0.2	0.4	-0.5	-0.1	-0.3	-0.2	-0.2	-0.3	-0.3	0.1	-0.1	-0.2	0.4	0.6	0	-0.1	-0.2
H	-0.3	-0.1	0.2	0.5	-0.1	-0.2	-0.1	0.5	-0.1	-0.1	-0.1	-0.1	0.3	0	0	0.4	-0.6	0	0	-0.1
N	0.4	-0.3	0.3	0.2	0.9	0.3	-0.2	-0.3	-0.2	0	-0.1	-0.1	-0.2	0.1	-0.1	0.1	0.1	-0.1	-0.1	-0.2
Q	0.5	-0.4	0.6	0	0.1	0.3	-0.2	-0.4	0	0.2	-0.1	-0.1	-0.2	-0.1	-0.1	-0.2	0.4	0.3	0	-0.1
S	-0.5	0.1	-0.1	0.3	0	0.7	-0.1	-0.1	-0.1	-0.1	-0.3	-0.1	0	0	0.3	-0.1	0.7	-0.1	0	-0.1
T	-0.2	-0.1	-0.1	-0.4	0.1	-0.1	0	0.7	0	-0.1	-0.1	0	0.6	0	-0.1	-0.1	-0.1	0	0	0
G	-0.4	-0.3	0.1	0	0.4	-0.5	-0.1	0.5	0.5	0.7	1	-0.2	0.4	0.1	-0.3	-0.2	-0.5	0.2	-0.1	-0.2
P	-0.3	-0.1	0.3	0.1	0.3	0.2	-0.1	0.2	0	-0.1	0.6	0.2	-0.3	0	-0.3	0	-0.4	0	0	-0.1
C	-0.1	0	-0.2	-0.1	0.1	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0202	0.2	-0.9	-1.2	-0.7	-0.7	-0.5	-1.1	-0.6	0.9	0.3	0.9	0.5	0	1	0.9	0.6	0	1.6	0	-1
0203	0.9	0.1	2	1.4	2.1	0.1	-0.4	0.3	-0.7	-0.4	-0.5	-0.7	-0.1	-1	-0.6	-0.3	0.9	-0.5	-1.2	-0.3

Select residue pair below:

i_j	Score	Prob
0203_0245	1.627	1.00
0198_0203	1.118	0.96
0058_0203	0.956	0.90
0203_0247	0.776	0.72

Local Interactions:

i_j	Score	Prob
0201_0203	1.541	1.00
0202_0203	0.568	0.38

See all coupling residues
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