May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
India-Argentina Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [D:0199] and [G:0200]
- A F I L V M W Y D E K R H N Q S T G P C
A 1 -0.1 0 -0.4 -0.2 -0.1 -0.1 -0.1 0.6 0.2 0 -0.2 -0.1 -0.6 0.9 -0.2 -0.2 -0.3 0.5 -0.1
F -0.1 0 0 0 0 0 0 0 -0.1 -0.2 -0.1 -0.1 0 -0.1 0.3 -0.1 -0.1 -0.1 0 0
I -0.5 0 0 -0.1 -0.1 0 0 0 0.5 0.3 0.4 -0.3 -0.1 0.1 0.2 0 -0.1 0.1 -0.1 0
L 0.2 0 0 -0.1 -0.1 0 0 0 0.5 0.3 0.5 -0.1 -0.1 -0.1 -0.4 -0.1 -0.2 -0.1 0.2 0
V -0.1 0 -0.1 -0.2 -0.1 0 0 0 0 0.3 -0.3 -0.2 0.1 0.9 0.9 -0.6 -0.5 0.6 -0.4 0.1
M -0.2 0 0 0 0 0 0 0 0.1 0.1 -0.2 -0.1 0 0.3 -0.1 -0.1 0.2 -0.2 -0.1 0
W -0.1 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0 0 0 -0.1 -0.1 -0.1 0 0
Y -0.2 0 0 -0.1 0 0 0 0 0.1 0 0 -0.2 -0.1 -0.1 -0.2 -0.2 -0.2 0.2 0.4 0
D 0 -0.1 0.2 0.4 0.4 -0.1 -0.1 -0.2 -0.3 -0.6 0.2 1 0 -0.4 -0.4 0 0.5 0.3 -0.5 -0.1
E 0.1 -0.1 -0.3 0.5 -0.2 0.3 -0.2 -0.1 -0.6 0 0.7 0.3 -0.1 0 0.3 0.2 0.5 -0.3 0.4 -0.1
K 0.1 -0.1 -0.2 -0.1 0.1 -0.1 -0.1 0.3 0.2 0.7 0.3 -0.4 -0.4 0.6 0.1 0 -0.1 -0.5 0.2 -0.1
R 0.3 -0.1 0.2 -0.1 0.4 -0.1 -0.1 -0.1 0 0.5 -0.3 0.2 -0.4 -0.3 0.1 0.3 0.6 0 -0.3 -0.1
H 0.3 -0.1 -0.2 -0.3 -0.1 0 0 0 0.2 0.1 -0.4 -0.6 0.8 0 -0.4 0.4 -0.2 0.4 0.3 0
N -0.1 0 -0.1 -0.1 -0.1 0 0 -0.1 -0.3 -0.1 0.3 -0.2 0.2 0.7 -0.2 -0.3 0.2 0.1 0.1 0
Q -0.1 0 -0.1 0 -0.2 0 -0.1 0 -0.7 0 -0.1 0.3 0 0 -0.3 0.6 0.5 0 0.4 -0.1
S -0.2 0 -0.1 0.2 -0.1 0 0 0 -0.7 0 0.1 0 0.1 -0.1 -0.4 -0.1 0.3 0.7 0.1 0
T 0 -0.1 -0.1 0.4 -0.2 0 0 0 -0.1 -0.3 0.1 -0.1 0.1 -0.1 0 0.5 -0.2 0.4 0.3 -0.1
G 0 0 -0.1 -0.2 0.3 0 0 0 0.2 0.2 -0.4 0.8 -0.1 0.1 -0.3 -0.2 -0.2 -0.1 -0.2 0
P 0.3 0.2 0.5 0.3 0 -0.2 0.1 -0.1 0.5 0.1 0.1 0.3 0.3 -0.1 0.7 0.8 -0.6 -0.1 -1.2 0
C -0.1 0 0 0 0 0 0 0 -0.1 0.1 -0.1 -0.1 0 -0.1 -0.1 -0.1 0.4 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0199 0.6 -1.3 -0.4 0.1 0.1 -0.9 -1.4 -1.1 1.1 0.9 0.4 0.7 -0.4 0.3 0.5 0.3 0.3 -0.1 2.1 -1.1
0200 0.8 -1.3 -0.8 -0.4 -0.6 -1.2 -1.2 -1.1 1.5 1.6 0.8 0.2 0 0.6 0.8 0.5 0.5 0.5 -0.1 -1.2
Select residue pair below:
i_j Score Prob
0179_0200 1.409 1.00
0178_0200 1.163 0.97
0110_0200 0.711 0.62
0056_0200 0.565 0.38
0177_0200 0.564 0.38
Local Interactions:
i_j Score Prob
0198_0200 1.203 0.98
0200_0201 0.978 0.91
0199_0200 0.845 0.81
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...
Page generated in 0.0229 seconds.