OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [G:0197] and [D:0202]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.2	0	0	0	0	0.4	0	0	0	0.2	0	0.4	-0.1	-0.1	0.1	-0.2	-0.1	-0.3	-0.1	0
F	0.4	-0.1	-0.1	-0.2	-0.1	-0.3	-0.1	-0.2	-0.7	0	0.3	0.6	0	0.5	-0.3	0.8	-0.5	0.2	0.5	-0.1
I	-0.4	0.3	0	-0.1	0	0	-0.1	0.6	-0.6	-0.3	-0.1	-0.2	-0.2	-0.1	-0.1	0.4	0.4	0.6	-0.2	-0.1
L	0.1	-0.1	-0.1	0.1	0	-0.3	-0.1	0.2	-0.7	0.1	-0.4	0.5	-0.3	0	0.3	-0.2	0.2	0.5	0.4	0.2
V	0.1	-0.1	0	-0.1	1	0	-0.1	-0.1	-1.1	-0.4	-0.6	-0.2	0.6	-0.5	0.5	-0.4	0.9	0.1	0.7	0.3
M	-0.1	0	0	0	0	0	0	0	0.1	-0.2	-0.1	-0.3	-0.1	0.2	0	-0.1	-0.1	0.6	-0.1	0
W	-0.4	-0.2	-0.1	0	-0.3	-0.4	-0.1	-0.3	0.1	0.6	1.1	1.1	0.2	0.3	0.5	0.1	-0.6	-0.5	-0.5	-0.1
Y	0.1	-0.1	-0.1	-0.1	-0.3	0.9	0.2	-0.4	0.2	0.4	0.9	0.6	0.2	0.6	0.4	0	-0.7	-0.4	-0.3	-0.3
D	-0.1	0	0	0	0	0	0	0	0.8	-0.1	-0.2	-0.2	0	-0.2	-0.1	-0.1	0	-0.2	0	0
E	-0.2	-0.1	0	0	0	-0.1	0	-0.1	-0.6	0.1	0.7	-0.7	-0.1	0	0.5	-0.3	0.7	0.1	0.3	0
K	-0.1	0	0	0	0	0	0	0	-0.1	-0.1	-0.4	-0.2	0	0.3	0.3	-0.1	0	-0.1	0	0
R	0.1	0	0	0	-0.1	0	0	0	1	-0.2	-0.3	-0.6	-0.1	-0.2	-0.2	0.3	-0.2	0.3	-0.1	0
H	0.4	-0.1	0	0.3	-0.2	-0.1	-0.1	-0.1	0.7	-0.3	-0.1	0.3	0	0.5	-0.2	0	-0.5	0.5	-0.2	-0.1
N	-0.1	0	0	0	0	0	0	0.4	0.5	-0.1	0	-0.3	-0.1	0.1	-0.1	-0.1	-0.1	-0.3	0	0
Q	-0.1	0	0	0	0	0	0	0	-0.2	-0.1	-0.1	0	0	0.1	-0.1	-0.1	0	0.2	0	0
S	0.2	0	0	0	0	0	0	0	0.4	-0.2	0.2	0.1	0.3	-0.5	-0.3	-0.3	0.4	0	-0.1	0
T	-0.3	0.4	0	0	-0.1	-0.1	0	0	0.1	0.1	-0.1	-0.1	-0.1	0.2	-0.3	0.4	0.1	-0.2	0	0
G	-0.1	0	0	0	0	0	0	-0.1	0.8	0.2	-0.3	-0.3	-0.1	-0.4	-0.3	0.2	0.2	0.3	-0.1	0
P	0	0	0	0	0	0	0	0	-0.1	0	-0.1	-0.1	0	-0.1	0	0	0	-0.1	0	0
C	0.3	0	0	0	0	0	0	0	-0.1	0.2	0.2	-0.1	0	-0.2	-0.1	-0.1	-0.1	-0.3	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0197	-0.1	0.7	1.2	1.3	1.3	-0.3	0.2	1.6	-0.9	-0.2	-0.7	-0.2	0.7	-0.6	-0.5	-0.1	0	-0.3	-1.2	-0.9
0202	0.2	-0.9	-1.2	-0.7	-0.7	-0.5	-1.1	-0.6	0.9	0.3	0.9	0.5	0	1	0.9	0.6	0	1.6	0	-1

Select residue pair below:

i_j	Score	Prob
0202_0244	3.035	1.00
0197_0202	1.343	0.99
0202_0242	0.794	0.75
0202_0243	0.600	0.44
0202_0241	0.556	0.36

Local Interactions:

i_j	Score	Prob
0201_0202	0.758	0.70
0202_0203	0.568	0.38

See all coupling residues
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