May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

India-Argentina Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [T:0195] and [V:0196]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.8 0 0.3 0.4 0 -0.2 1.3 0.6 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.2 -0.3 -0.2 -0.3
F 0.5 -0.7 0.8 0.2 1 0 -0.2 -0.3 0 0 -0.1 0 0 0 0 -0.2 0 -0.2 -0.1 -0.2
I 1.2 -0.7 0 0 0.3 -0.1 -0.3 -0.8 0 0 0.3 0 0 0 0 0 -0.4 0.9 -0.1 0.5
L -0.3 -0.1 0.5 -0.1 0.2 0.7 1 -0.5 0 0 -0.1 0 0 0 0 -0.2 -0.2 -0.3 -0.1 0.1
V 1 -0.5 0.5 -0.1 0.7 0 -0.2 -0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.4 -0.1 0.5 -0.3 0.4
M -0.2 -0.4 0.6 0.8 0.2 0.3 -0.2 -0.2 0 0 0 0 0 0 0 0.3 -0.4 -0.1 -0.1 -0.3
W 0.6 -0.5 -0.5 -0.6 0.2 0 -0.2 -0.2 0 0 0 0 0 0 0 0.5 0.8 0.2 0 -0.1
Y -0.1 -0.5 0.5 -0.1 0.1 0.3 -0.1 0 0 0 0 0 0 0 0 -0.1 0.5 -0.1 0 -0.1
D 0 0 -0.1 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 -0.1 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 -0.1 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 -0.1 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0.4 -0.2 -0.2 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N -0.1 0.5 -0.1 0.1 -0.6 -0.1 0 0 0 0 0 0 0 0 0 0 0.3 0 0 0
Q -0.2 -0.2 0 0.1 0.5 -0.1 0 -0.1 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0
S -0.9 0.9 -0.2 -0.3 0 0.1 -0.3 1.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.6 -0.3 1.2 -0.1
T 0.2 0.9 -0.3 -0.1 0.7 -0.3 -0.2 0 0 0 0 0 0 0 0 -0.1 0.2 -0.2 -0.1 0.2
G -0.2 0.7 -0.6 1 -0.7 0.6 -0.1 -0.3 0 0 0 0 0 0 0 -0.1 -0.1 -0.2 0 0
P 0 0 -0.1 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.4 1 -0.3 0.7 -0.8 -0.5 -0.3 1 0 0 0 0 0 0 0 -0.1 0.5 -0.2 -0.2 -0.1

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0195 -0.1 0.9 1.3 0.9 1.4 0.3 0.2 0.6 -1.1 -1.1 -1.1 -1.1 -0.9 -0.3 -0.7 1.2 1.3 0.1 -1.1 0.1
0196 0.3 1.1 1.3 2.6 1.2 0.9 0.2 0.3 -0.9 -0.9 -0.7 -0.9 -0.9 -0.9 -0.9 -0.3 0.4 -0.9 -0.3 0
Select residue pair below:
i_j Score Prob
0089_0196 2.234 1.00
0117_0196 1.647 1.00
0119_0196 1.509 1.00
0182_0196 1.302 0.99
Local Interactions:
i_j Score Prob
0194_0196 0.703 0.61
0195_0196 0.654 0.53
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...

Page generated in 0.0162 seconds.