May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

India-Argentina Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [T:0190] and [L:0209]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 0.5 -0.6 -0.4 0.2 1.1 -0.2 -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.3 1.1 -0.8 -0.4 -0.2 -0.4 1.3
F -0.8 0.6 -0.3 0.5 0.2 -0.3 0 0 0 0 0 0 0.6 -0.1 0 -0.1 -0.2 0 -0.1 -0.2
I -0.1 -0.1 -0.1 0.3 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L -0.1 0 -0.1 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V -0.2 -0.1 0.6 0 -0.2 -0.1 0 0 0 0 0 0 -0.1 -0.1 -0.1 0.6 -0.1 0 -0.1 0
M 0.2 0 -0.1 -0.3 -0.1 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0.3 0 0 0
W 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.1 -0.1 0.2 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 2.5 -0.2 0 -0.7 -0.4 -0.2 0 -0.1 0 0 0 0 -0.5 -0.2 -0.3 0.8 -0.3 0 -0.1 -0.1
E -0.5 -0.2 0.4 0 1.1 -0.2 0 0 0 0 0 0 -0.1 0.6 -0.1 -0.2 -0.3 0 -0.1 -0.1
K -0.1 0 -0.1 -0.3 -0.1 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0.7 0 0 0
R 0.3 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0
H -0.1 -0.1 -0.1 0.4 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
N -0.1 -0.2 -0.1 0.4 -0.5 -0.2 -0.1 0.3 0 0 0 0 0.3 0.2 -0.1 -0.2 0.1 0 0.7 -0.1
Q 0.2 -0.1 0.5 -0.5 0.6 -0.1 0 0 0 0 0 0 -0.1 -0.1 0 0.3 -0.1 0 -0.1 -0.1
S 0.2 0.1 -0.2 0.1 0.1 0.4 -0.3 -0.1 0.3 -0.2 -0.1 -0.1 0.2 -0.1 0 0 0.4 0.3 0.5 -0.4
T -0.3 -0.1 0.3 0.6 0 -0.4 -0.1 -0.3 -0.3 0 -0.2 -0.2 0.2 1 -0.1 0.1 0.9 -0.2 0.1 -0.3
G -0.7 0.6 0 1 0 0.2 0.6 0.2 -0.1 0 0 0 -0.3 -0.4 0.1 0 -0.3 -0.1 -0.2 -0.1
P 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.4 0.2 0.6 -0.2 0 0.2 0 0 0 0 0 0 -0.1 -0.1 -0.2 0.2 -0.1 0 -0.1 -0.1

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0190 1.3 -0.5 -0.4 -0.7 0 -0.5 -0.8 -0.6 0.3 0.2 -0.4 -0.7 -0.6 0.7 0.4 1.7 1.5 1.2 -0.8 -0.1
0209 0.6 0.8 1.2 0.8 0.9 0.3 -0.3 -0.6 -0.6 -0.9 -1 -1 -0.2 0.5 0.2 0.7 0.9 -0.7 -0.1 -0.4
Select residue pair below:
i_j Score Prob
0188_0209 1.003 0.93
0209_0236 0.741 0.67
0209_0251 0.681 0.57
0193_0209 0.662 0.54
0190_0209 0.650 0.52
Local Interactions:
i_j Score Prob
0209_0211 0.838 0.80
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...

Page generated in 0.0196 seconds.